Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0217 ATGGCAGTTTCTGTGTTAACAGTGTCACAGGACGGAACCGGACGCTACCGTACGGTACAGGAAGCCATAGATGCTGTGCCACTCGGCAATACTCGCCGGACGGTGATTCGGGTGTCGCCGGGAATCTACCGGCAGCCACTTTACGTGGCGAAGACGAAGAATTTCATCACTCTCACTGCTGTGCGCCCTGAGAACACTGTTCTGACATGGAACAACACTGCCACCAACATCCACCATCATCAAGATGGTCGAGTGATAGGGACTGGGACCTTCGGTTGTGGCAGCACCATTATAGAAGGAGGAGACTTTATTGCTGAGAATATTACGTTTGAGAATTCATCCCCTCAGGGTTCAGGGCAAGCAGTGGCACTTAGAGTAACAGCAGATCGATGTGCATTCTATAATTGCAGGTTTCTTGGATGGCAGGACACACTTTATTTACATTATGGTAAACAATATTTGAAAGATTGTTATATTGAAGGAAGTGTGGATTTTATTTTTGGTAATAGCACTGCACTCTTGGAGCATTGTCATATCCACTGCAAGTCTGGAGGGTTCATAACTGCACAGAGCAGAAAATCTCCACAGGAAACAACTGGTTATGTATTCTTGAGATGTGTTATCACAGGTAATGGAGGAACTTCATATACATATCTTGGAAGACCATGGGGACCCTTTGGAAGAGTGGTCTTTGCATTCACTTATATGGATCAATGTATAAAGCCCTGTGGCTGGAATAACTGGGGGAAAATTGAGAATGAAAGAAGTGCTTGTTTCTATGAATACAGGTGTTTTGGGCCGGGTTGCTGTCCATCGGGGCGAGTAAAATGGGCTAAAGAATTAAGGGATGAAGAAGCTGAGGAGTTTCTGATGCATAGCTTCATTGACCCACAATCAGATAGACCTTGGCTTGCTCAAAAAATGGCTTTGAGGATTCCACTTTCTGCTTAG 951 0.4511 MAVSVLTVSQDGTGRYRTVQEAIDAVPLGNTRRTVIRVSPGIYRQPLYVAKTKNFITLTAVRPENTVLTWNNTATNIHHHQDGRVIGTGTFGCGSTIIEGGDFIAENITFENSSPQGSGQAVALRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSGGFITAQSRKSPQETTGYVFLRCVITGNGGTSYTYLGRPWGPFGRVVFAFTYMDQCIKPCGWNNWGKIENERSACFYEYRCFGPGCCPSGRVKWAKELRDEEAEEFLMHSFIDPQSDRPWLAQKMALRIPLSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0217 316 Gene3D - 2 310 IPR012334 -
Apr6g0217 316 SUPERFAMILY Pectin lyase-like 5 303 IPR011050 -
Apr6g0217 316 PANTHER PECTINESTERASE 1 315 - -
Apr6g0217 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Apr6g0217 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Apr6g0217 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0217 Apr-Chr6 2312159 2315293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0217 5 309 Carbohydrate Esterase AT5G47500 36.624 8.79e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0217 K01051 - gmx:100810259 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0217 6 2312159 2315293 Apr6g0217 6 2312159 2315293 ECH