Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr6g0199 | ATGGAGATAATAACAAACGCCAACACCAACATCAACACCACCAACGCCAACACCCCAACAGGTGCAAAGTCGCCAGAACCTGAATCCGAGACTCCGACCCGGATCCACCAACCCGGATCCACAAACACAAAGCCCTTATCTTTTTCCAATGGAGTCTTAAAGCGCCACCACCCTCTCCAACACCACAACCCCCACCACCATGCAAACCAACCCATCACTGTCACCTACAAGGAATGCTTGAAGAACCACGTCGCAAGCTTAGGTGGCCACGCCTTGGACGGTTGCGGCGAGTTCATGCCCTCGCCGGCAGCCACCGCCGACGACCCAAGTTCCATCAAATGTGCCGCCTGTGGCTGCCACCGGAACTTCCACCGCCGGGAACCGGATGAACCACCCATTTCTCCGGTGACCCATCATGTGCTGGAGTACCAGCCCCACCACCGCCACCACCCTCCGCCGCCACCGCCGCCTTATCGGAGCCCCAATTCCGCGTCTCCGCCGCCGATTTCGTCCTACCCATCAGCACCCCACATGCTCCTCGCCCTCTCCGGCGGCGGGCTCCCCATCCCGCCAGAAAACACCGCCGCGCCGGCGATGGGTTCTCACTCCCGGAAACGGTTCAGGACGAAGTTCACGCAGGAGCAGAAGGAGAAGATGCACGAGTTCGCTGAGAAAGTGGGGTGGAAGATGCAGAAGAGAGATGAAGAAATGGTTATGGAGTTTTGCAATGAGGTTGGTGTGGATAGAGGGGTCCTCAAGGTTTGGATGCACAACAACAAGAACACTTTTGGGAAGAGAGATAACGGTAACGTTAACGCCAACGGCACCGCTCCAAATGTTCTCGAACATGGCAGCACTATTAACGGCGGAATTAACGGTAACGGTAACGGTAACGATGAAGAGGAGAACAACGATAACCATAACAACATCAACCTCGGTTCCCAGGATCCGAATCAGTACGAGAATGATAGTGGGACTAACGTTGGTACTAATGGGTCTTCTTCTTCTTCTTGA | 1014 | 0.5523 | MEIITNANTNINTTNANTPTGAKSPEPESETPTRIHQPGSTNTKPLSFSNGVLKRHHPLQHHNPHHHANQPITVTYKECLKNHVASLGGHALDGCGEFMPSPAATADDPSSIKCAACGCHRNFHRREPDEPPISPVTHHVLEYQPHHRHHPPPPPPPYRSPNSASPPPISSYPSAPHMLLALSGGGLPIPPENTAAPAMGSHSRKRFRTKFTQEQKEKMHEFAEKVGWKMQKRDEEMVMEFCNEVGVDRGVLKVWMHNNKNTFGKRDNGNVNANGTAPNVLEHGSTINGGINGNGNGNDEEENNDNHNNINLGSQDPNQYENDSGTNVGTNGSSSSS* | 338 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr6g0199 | 337 | MobiDBLite | consensus disorder prediction | 144 | 177 | - | - | |
Apr6g0199 | 337 | MobiDBLite | consensus disorder prediction | 266 | 337 | - | - | |
Apr6g0199 | 337 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 76 | 127 | IPR006456 | - | |
Apr6g0199 | 337 | PANTHER | HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN | 7 | 289 | - | - | |
Apr6g0199 | 337 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 75 | 127 | IPR006456 | - | |
Apr6g0199 | 337 | MobiDBLite | consensus disorder prediction | 266 | 299 | - | - | |
Apr6g0199 | 337 | Gene3D | - | 191 | 264 | - | - | |
Apr6g0199 | 337 | MobiDBLite | consensus disorder prediction | 150 | 173 | - | - | |
Apr6g0199 | 337 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Apr6g0199 | 337 | SUPERFAMILY | Homeodomain-like | 194 | 265 | IPR009057 | - | |
Apr6g0199 | 337 | Pfam | ZF-HD protein dimerisation region | 74 | 128 | IPR006456 | - | |
Apr6g0199 | 337 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 7 | 289 | - | - | |
Apr6g0199 | 337 | MobiDBLite | consensus disorder prediction | 307 | 337 | - | - | |
Apr6g0199 | 337 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Apr6g0199 | 337 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 204 | 261 | IPR006455 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr6g0199 | Apr-Chr6 | 2084043 | 2085663 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr6g0199 | 10 | 260 | ZF-HD Transcription Factor Family | AT5G15210 | 53.125 | 1.44e-75 | 232 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | zf-HD | Apr6g0199 | ZF-HD_dimer | 7.2e-28 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr6g0199 | - | - | ccaj:109793219 | 397.897 |