Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0156 ATGGATCTGAGGAATACGTTTTCATCGTCTTTGCTAATTTTGAGCTTGTTGGGTATTTGTGTGTCCTTCGCTTCTTCGCAGGTCGAAGACGACGTGAAATGTCTGAAGGGCATAAAGGACACCTTGGAGGACCCTCAGGGTCGGCTTGCCACGTGGCGGTTCGACAACACCACCGTGGGTTTCATCTGCGACTTTGTGGGGGTGTCTTGCTGGAACCAAAGGGAGAACCGGGTTTTGGGTTTGGAGCTCCGAGAGTTGAAGCTTTCGGGTCGGATCCCAGAGTCCTTGAAGTACTGTGGTAAGAGTATTCAAAGGTTGGATCTTGGGTCTAATTCTCTAACTTCTGTGATTCCACCTGAGATCTGTAGTTGGATGCCTTTTTTGGTTTTGATGGATTTGTCTGGTAATGATCTTTCGGGGCCTATTCCACCTACCCTTGTAAATTGTTCTTATTTGAATGATTTGGTGTTGTCAGATAATCAACTTTCTGGTTCAATTCCCTATGAGTTTGGGAGTTTGGGTAGGTTGAAGAAGTTTTCTGTGGCTAATAATAAGCTTAGTGGGACTATTCCTTCATTTTTCAATGGGTTTGATAGAGAGGATTTTGAAGGGAATAGTGGGTTGTGTGGTGGTCCTCTTGGATCCAAGTGTGGAGGGTTGAGTAAGAAGAATCTTGCTATTATTATTGCTGCTGGTGTGTTTGGTGCTGCTGCTTCTTTGTTGTTGGCTTTTGGGTTGTGGTGGTGGTACCATTTGAGGTTGAGTGGGAAGAGGAAGAAGGGAGGGTATGGGGTTGGGGGTGTTGATGATTGGGCTGTGAGGTTGAGGGGTCATAAGCTTGTGCAGGTTACACTCTTTCAGAAGCCTATTGTCAAGGTTAAATTGGGTGATTTGATGGCTGCTACTAACAATTTCAGTGCTGAGAATGTTCTTTTCACCACGAGGACCGGGACTACTTATAAAGCTGATCTTCCTGATGGGTCCACGCTTGCGGTGAAGCGCTTGAACACTTGTAAGATTGGGGAGAAGCAGTTTCAGATGGAGATGAATCGGTTGGGCCAGGTTAGGCACCCGAATTTGGCGCCCCTTTTGGGGTTCTGTGTTGTGGAGGATGAGAAGCTTTTGGTTTATAAGCACATGTCTAATGGGACGCTGTATTCGTTGTTGCATAAGAATAGCACTGCATTGGACTGGCTGATGAGGTTCAGGATAGGGTTGGGCGCGGCTAGGGGTCTTGCCTGGCTGCACCATGGCTGCCACCCTCCCATTATTCAGCAGAACATTTGTTCCAATGTGATTCTTGTTGATGAGGAATTTGATGCTCGGTTGATGGACTTTGGACTCGCGAGGCTCATGACCTCTGACTCTAATGGTAGGTTTGTGAATGGTGATTTGGGGGAACTCGGCTACATAGCTCCAGAGTATTCAAGTACACTGGTTGCTTCATTAAAAGGGGATGTGTATGGGTTTGGAGTTTTGCTTTTGGAGCTGGTGACCGGGCGCAAACCTCTCGAGGTGAGCAATGGGGAGGAGGAATTTAAGGGTAACTTAGTGGATTGGGTAAATATGCATTCTAGTTCGGGCCGAATGAAGGATTGCATTGATAAAGCCATATGTGGAAGGGGACATGATGAGGAGATTCTACAGTTTCTGAAAATTGCATCTAATTGTGTGGTTTCTCGCCCCAAGGATAGGTGGTCTATGTACCAAGTTTATCATTCCTTAAAGAGTATATCCAGAGATCACAGTTTCTCTGAACATGATGATGAATTTCCCTTGATCTTTGGTAAGCCAGAAAATGAGCTGGCGTAG 1812 0.4608 MDLRNTFSSSLLILSLLGICVSFASSQVEDDVKCLKGIKDTLEDPQGRLATWRFDNTTVGFICDFVGVSCWNQRENRVLGLELRELKLSGRIPESLKYCGKSIQRLDLGSNSLTSVIPPEICSWMPFLVLMDLSGNDLSGPIPPTLVNCSYLNDLVLSDNQLSGSIPYEFGSLGRLKKFSVANNKLSGTIPSFFNGFDREDFEGNSGLCGGPLGSKCGGLSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLRLSGKRKKGGYGVGGVDDWAVRLRGHKLVQVTLFQKPIVKVKLGDLMAATNNFSAENVLFTTRTGTTYKADLPDGSTLAVKRLNTCKIGEKQFQMEMNRLGQVRHPNLAPLLGFCVVEDEKLLVYKHMSNGTLYSLLHKNSTALDWLMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEEFDARLMDFGLARLMTSDSNGRFVNGDLGELGYIAPEYSSTLVASLKGDVYGFGVLLLELVTGRKPLEVSNGEEEFKGNLVDWVNMHSSSGRMKDCIDKAICGRGHDEEILQFLKIASNCVVSRPKDRWSMYQVYHSLKSISRDHSFSEHDDEFPLIFGKPENELA* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0156 603 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 597 - -
Apr6g0156 603 SUPERFAMILY Protein kinase-like (PK-like) 282 575 IPR011009 -
Apr6g0156 603 Gene3D Transferase(Phosphotransferase) domain 1 380 598 - -
Apr6g0156 603 ProSiteProfiles Protein kinase domain profile. 305 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0156 603 PANTHER RECEPTOR-LIKE PROTEIN 55 12 597 - -
Apr6g0156 603 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Apr6g0156 603 Gene3D Ribonuclease Inhibitor 28 219 IPR032675 -
Apr6g0156 603 CDD STKc_IRAK 313 578 - -
Apr6g0156 603 Pfam Protein tyrosine and serine/threonine kinase 326 571 IPR001245 GO:0004672|GO:0006468
Apr6g0156 603 Gene3D Phosphorylase Kinase; domain 1 267 379 - -
Apr6g0156 603 SUPERFAMILY L domain-like 27 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0156 Apr-Chr6 1503192 1505644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0156 11 601 Receptor kinase-like Gene Family AT3G28450 64.489 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Apr6g0156 PK_Tyr_Ser-Thr 4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0156 - - gmx:100810378 1008.82