Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0151 ATGGGTCATAGAGCAAAAATATGTTGGTGGGTGCCTAAGAAGCCGGCTCAATCTGATGATATACCACAAGCTCTAGCTGCACTCACCCTAGATAACACAATAGCTGAAACAGAATGGACCTCTGACACTGGAGCATCCAACCATATGACAGGTAAACCAAGTATGCTTAATAACATAAAAAAATACTCAGGTACAGATTCTGTCCTTATTGGTGATGGTTCTTCACTATCAATACTTGGTATTGGAGACTCCTTCATCAAGCAAAGGAATGTTACTCAACCCCTTCATGATGTCTTACTAGTTCCTTCCTTAACAAAGAATCTACTCTCTATAAGTCAATTAACTACGCAATTTTCTGTTAATTGTGAATTTTCTAATGTTGATTTTTGTGTTAAGAAACGAGAAACAGGGAAACCCATGATCACAGGGAGGTGCAAGGGTGATCTATATGTACTTTCTCCCTCACCTGAATTGCATTACTCTCATCGTTTCAAATCTGGATCAGCAAACACTTGGCATCAATGTCTAGGACATCCTCAAACTATAGCTTTACAATTGCTAAAGAATAAAGGGTGTGGAGTGGAATGCGTGTGGAAGCACAACTGTGTTAGTGTTGAAATGGTTCCAAAGGCAAAAAATGGGTCCATTCAATCCATTTTCATGCATGCTGATAGCTTAGACTGGGTTTTTATGGTTTTTGGTTTCTTGGGTGCTATTGGTGATGGTTTCACCACCCCTTTTTGCTTATATATCACTAGTCGAATTATGAACAACATTGGTAGCGTTTTAACAATGGCACCCAGCACTTTCATTCAAAACGTCAATAAGTATTCACTGACGTTGTCATATTTGGCTACTGTGTCTTTTTTTGCTTCCTTCCTTGAGGGCTATTGTTGGACAAGAACAGGTGAAAGACAAGCTGCAAGAATGAGAGTAAGGTATTTAAAAGCAGTACTCAGACAAGACGTAGCATACTTTGATTTGCATGTCTCAAGCACATCAGAAGTTATCACCTGTATCTCTAATGATAGCCTCATAATTCAAGATGTACTCAGTGAAAAGGTTCCAAATTTACTGATGAATTTCTTTAGGTTTCTTGGGAGCTACATAGTGGCTTTTGCATTGTTATGGAGATTGGCCATTGTGGGGTTGCCCTTTGTGATTCTTCTTGTGATTCCGGGTTTAATTTATGGTAAGATTTTGATGAGGTTGGCTAGAAAGATAAGAAAAGAGTACAGTAAGGCTGGTACAATAGCAGAACAAGCAATATCTTCCATCAGAACCGTTTATTCCTTTGTGGGGGAAGGCAAGACCATGGATGCTTTCTCTAATGCTCTGCAAGGATCAGTTAAGTTGGGGTTGAAACAAGGGTTAGCTAGAGGCATGGCCATTGGAAGCAAAGGTGTTGTCTTTGCTATATGGTCTTTCATGGCATATTATGGAAGTAGATTGGTCATGTACCACGGTGCTAAAGGAGGAACTGTGTTTGCAGTTGGAGCAGTCATGTGTGTTGGTGGAACGGCATTAGGTAGTTGTTTATCTGATTTGAAGTACTTCTCAGAAGCATGTGCTGCTGGGGAACGCATAATGGAAATGATAAGAAGAGTTCCTAAGATTGATTCTGAAAATATGGTTGGAGAGATTTTAGAGAAGGTTTTAGGCGAAGTGGAATTTCATCATGTTAAATTTGTGTACCCATCAAGGCCAAATAGTGTTATTCTAAATGATTTTTGTCTCAAGATTCCAGTTGGGAAAAAAATGGCCTTGGTTGGAGAGAGTGGTTCAGGAAAATCCACTGTGATAGCACTTCTGCAAAGATTTTATGACCCTATTGAGGGAGAGATACGTCTTGATGGTGTGGCTATTCATAGGTTGCAACTCAAATGGTTGAGATCTCAAATGGGTTTGGTGAGTCAAGAACCTGCTTTGTTTGCAACTAGCATTAAAGAGAACATACTTTTTGGAAGAGAAGATGCTACTCATGAAGAGATTGTGGAGGCTGCTAAAGCTGCCAATGCTCATGATTTCATTTCACAGTTGCCACAAGGATATGATACCCAGGTTGGAGAGAAAGGAGTTCAAATGTCAGGAGGACAGAAACAAAGGATTGCTATTGCCCGAGCAATAATAAAAAATCCACAAATTCTCCTTTTAGATGAAGCAACAAGTGCACTAGACTCTGAATCCGAACGCAAAGTGCAAGAAGCTATTGACAAAGTTGCTATAGGTCGAACAACCATCATCATAGCTCACCGCTTATCCACCATAAGAGATGCATGTGTTATTACTGTTATGCTGAATGGCAAGATCATGGAAATGGGCTCCCATGATGAACTCATGCAAAAAAACAATGGATTTTACACATCATTGGTTCATTTTCAACAAATTGAGAAATCAAAATGTGATTTAGATGACACACACTCTCTCACTTCTACTTCATCTACATCAAATGAAGATAATTTAGATGGTCAATTGCTCTCATTTGTAAGTCATTCTATTCCTACAAACTTGGCATCTCAATCTTCACTTGCTAATGAAGAGAATGCTGAAAAAGATAGAGATGATCAAAAGTTTCCATCCCCTTCATTTTGGAGATTGTTTGCCTTGAATCTCCCTGAATGGAAACAAGCATTTTTGGGGAGTTTAAGTGCAATGTTATACGGTGCAATTGAGCCATTGTACGCATTTGCGTTGGGGTCGATGATATCAATTTATTTTCTCACAAATCATGATGAGATGAAAAGGAAAGTTGCCATTTATTCCTTATTTTTTGTGGGATTGGCAATGTTTTCGTTGGTTGTTAATATCATTGAACATTATAGTTTTGCTTACATGGGAGAGTACTTGACCAAAAGGGTGAAAGAAAGAATGCTTTCCAAGATACTCACTTTCGAGGTTGGGTGGTTTGATCGAGAAGAAAATTCTACTGGTGTTGTTTGCTCTAGACTAGCTACAGAACCCAACACAATAAGATCTTTAGTGGGAGATAGAATGGGTTTGTTGGTACAAACAATCTCTGCTGTGATTATAGCATGCACAATGGGCCTAATCATTGCATGGAGACTAGCTATTATATTGATAACTGTTCAACCTATAGCCATCGGTTGCTTTTACACAAGACTTGTACTACTAAAGGGTATGTCTAACAAAGCCATCAAAGCTCAAGATGAAAGTAGCAAGTTAGCTGTTGAAGCTGTTTCCAACCTTCGAACCATCACTGCTTTTTCCTCACAAGATCGATTTATTAAAATGCTTAAAAATGCACAAGAAGGTCCAAGTCGTGAGAGCATTCGACAATCATGGTTTGCAGGCATTGTCCTTGGATTAGCTCGAAGCCTTACAACTTTCACTCGAGCTATAGAATATTGGTATGGTGGAAAGCTTGTTTCCCATGGCTACATTACTTCAAAAGCAATGTTTCAGACCGTTTTAATTTTGGCGAATACAGGTAGAGTCATTGCAGATGCTAGTAGCATGACTAGTGACCTTGCAAAAGGAACAGATGCAGTTGACTTAGTTTTTTCAATCCTTTATAGAAACGCAAAAATTGAGCCTGATGAAAGGAATGCATATAAGCCTAAGAATTTAACAGGCCAAATAGAACTCCATGATGTTTGTTTTGCATACCCATCAAGACCTAGTGTAATGATTTTTCAAGACTTCTCAATCAAATTTGATGCAGGAAAATCAACAGCACTGGTAGGGCAAAGTGGGTCTGGTAAATCAACCATAATAGGCTTGATAGAGAGGTTTTATGACCCACTTAAGGGGATTGTGACCATGGATGGCAAAGACATAAAGTTATATCACCTTAGGTCTCTTAGGAACTATGTTGCACTTGTGAGCCAAGAGCCAACTCTTTTTAATGGGACCATAAGGGAAAACATTGCCTATGGATCATTTAATAAGACTAATGAAGTTGAGATCATTGAAGCAGCAAAAGCAGCTAATGCTCATGACTTTATTTCAAGCATGAAGGATGGTTATGACACATGGTGTGGGGATAGAGGAGTGCAATTATCTGGGGGCCAAAAGCAAAGGATTGCAATAGCTAGGGCCATACTAAAGAACCCCAAAGTGTTACTTTTGGATGAGGCCACTAGTGCACTTGATAGTCAATCAGAAAAGGTGGTTCAAAATGCGTTGGAAGGAGTGATGGTAGGAAGAACAAGTGTGGTGGTGGCTCATAGGTTGAGCACCATAAAGAGTTGTAATCAAATAGTTGTATTGGATAAAGGGAGAGTGGTAGAGGAAGGTACCCATTCATCTTTGTTGGGTAAGGGACAAAGTGGAGTTTACTACTCTTTGGTAAGTCTTCAGAGTAGGGCAGCAACAGACACTAGTGGCTATTAA 4353 0.3935 MGHRAKICWWVPKKPAQSDDIPQALAALTLDNTIAETEWTSDTGASNHMTGKPSMLNNIKKYSGTDSVLIGDGSSLSILGIGDSFIKQRNVTQPLHDVLLVPSLTKNLLSISQLTTQFSVNCEFSNVDFCVKKRETGKPMITGRCKGDLYVLSPSPELHYSHRFKSGSANTWHQCLGHPQTIALQLLKNKGCGVECVWKHNCVSVEMVPKAKNGSIQSIFMHADSLDWVFMVFGFLGAIGDGFTTPFCLYITSRIMNNIGSVLTMAPSTFIQNVNKYSLTLSYLATVSFFASFLEGYCWTRTGERQAARMRVRYLKAVLRQDVAYFDLHVSSTSEVITCISNDSLIIQDVLSEKVPNLLMNFFRFLGSYIVAFALLWRLAIVGLPFVILLVIPGLIYGKILMRLARKIRKEYSKAGTIAEQAISSIRTVYSFVGEGKTMDAFSNALQGSVKLGLKQGLARGMAIGSKGVVFAIWSFMAYYGSRLVMYHGAKGGTVFAVGAVMCVGGTALGSCLSDLKYFSEACAAGERIMEMIRRVPKIDSENMVGEILEKVLGEVEFHHVKFVYPSRPNSVILNDFCLKIPVGKKMALVGESGSGKSTVIALLQRFYDPIEGEIRLDGVAIHRLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATHEEIVEAAKAANAHDFISQLPQGYDTQVGEKGVQMSGGQKQRIAIARAIIKNPQILLLDEATSALDSESERKVQEAIDKVAIGRTTIIIAHRLSTIRDACVITVMLNGKIMEMGSHDELMQKNNGFYTSLVHFQQIEKSKCDLDDTHSLTSTSSTSNEDNLDGQLLSFVSHSIPTNLASQSSLANEENAEKDRDDQKFPSPSFWRLFALNLPEWKQAFLGSLSAMLYGAIEPLYAFALGSMISIYFLTNHDEMKRKVAIYSLFFVGLAMFSLVVNIIEHYSFAYMGEYLTKRVKERMLSKILTFEVGWFDREENSTGVVCSRLATEPNTIRSLVGDRMGLLVQTISAVIIACTMGLIIAWRLAIILITVQPIAIGCFYTRLVLLKGMSNKAIKAQDESSKLAVEAVSNLRTITAFSSQDRFIKMLKNAQEGPSRESIRQSWFAGIVLGLARSLTTFTRAIEYWYGGKLVSHGYITSKAMFQTVLILANTGRVIADASSMTSDLAKGTDAVDLVFSILYRNAKIEPDERNAYKPKNLTGQIELHDVCFAYPSRPSVMIFQDFSIKFDAGKSTALVGQSGSGKSTIIGLIERFYDPLKGIVTMDGKDIKLYHLRSLRNYVALVSQEPTLFNGTIRENIAYGSFNKTNEVEIIEAAKAANAHDFISSMKDGYDTWCGDRGVQLSGGQKQRIAIARAILKNPKVLLLDEATSALDSQSEKVVQNALEGVMVGRTSVVVAHRLSTIKSCNQIVVLDKGRVVEEGTHSSLLGKGQSGVYYSLVSLQSRAATDTSGY* 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0151 1450 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 216 1444 - -
Apr6g0151 1450 CDD ABC_MTABC3_MDL1_MDL2 1200 1440 - -
Apr6g0151 1450 Gene3D - 1190 1448 IPR027417 -
Apr6g0151 1450 SUPERFAMILY ABC transporter transmembrane region 865 1180 IPR036640 GO:0005524|GO:0016021
Apr6g0151 1450 Gene3D - 554 820 IPR027417 -
Apr6g0151 1450 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 878 1165 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr6g0151 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1189 1440 IPR027417 -
Apr6g0151 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 556 792 IPR003439 GO:0005524
Apr6g0151 1450 Pfam ABC transporter transmembrane region 232 497 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr6g0151 1450 Pfam ABC transporter transmembrane region 879 1144 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr6g0151 1450 Pfam ABC transporter 574 723 IPR003439 GO:0005524
Apr6g0151 1450 Pfam ABC transporter 1219 1368 IPR003439 GO:0005524
Apr6g0151 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 551 794 IPR027417 -
Apr6g0151 1450 CDD ABC_6TM_Pgp_ABCB1_D2_like 867 1183 - -
Apr6g0151 1450 ProSitePatterns ABC transporters family signature. 1340 1354 IPR017871 GO:0005524
Apr6g0151 1450 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 216 1444 IPR039421 -
Apr6g0151 1450 SMART AAA_5 583 769 IPR003593 -
Apr6g0151 1450 SMART AAA_5 1227 1413 IPR003593 -
Apr6g0151 1450 CDD ABC_MTABC3_MDL1_MDL2 556 794 - -
Apr6g0151 1450 CDD ABC_6TM_Pgp_ABCB1_D1_like 231 529 - -
Apr6g0151 1450 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 232 521 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr6g0151 1450 Gene3D ABC transporter type 1, transmembrane domain 283 1174 IPR036640 GO:0005524|GO:0016021
Apr6g0151 1450 SUPERFAMILY ABC transporter transmembrane region 227 529 IPR036640 GO:0005524|GO:0016021
Apr6g0151 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1200 1437 IPR003439 GO:0005524
Apr6g0151 1450 ProSitePatterns ABC transporters family signature. 695 709 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0151 Apr-Chr6 1441864 1457893 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0151 215 1449 Calmodulin-binding Proteins AT2G36910 43.062 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0151 K05658 - gmx:100808241 1924.06