Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0150 ATGGGTGGGGATCAGAAGAGTGATGTTTCCATGGTTGGAAAGAAGAACAAGAGGAATGGTTCTTTTCGGTCCATTTTCATGCATGCCGATGGCATAGATTGGTTTTTCATGATTTTGGGTGTTGTTGGGGCCGTTGGTGATGGCTTAGGCACCCCTCTTGTGTTGTTTATCACTAGCCACATTATGAACAACATTGGTGATTTTTCTGGCAGCATAGGCAGCACTTTCTTGCATAGCATCAATAAGAATGCCAAGGTCTTGTTATATTTGGCTTGTGGGTCCTTTGTGGCTTGTTTCCTTGGTGAAAGACAAGCCGCAAGAATGAGAGCAAGGTATTTAAAAGCAGTGCTAAGACAAGAGGTTGCATACTTTGATTTGCATGTCACAAGCACATCTGAGGTCATCACCAGCGTCTCTAATGACAGCCTCGTAATTCAAGACGTTCTTAGTGAAAAGGTTCCAAATTTTCTTATGAATGCCTCCATGTTTGTTGGAAGCTATATAGTGGCTTTTGCGTTATTATGGAGATTGGCAATTGTGGGGTTCCCTTTTGTGGCTCTGCTAGTGATTCCTGGTTTTATGTATGGGAGGACATTGATGGGGTTGGCGAGCAAGATAAGAGAAGAGTATAATAAGGCTGGTACAATAGCAGAACAAGCAATATCTTCCATTAGAACTGTCTATTCTTTTGTGGGGGAAAGCAAAACTATAGATGCTTTCTCTGATGCTCTACAGGGATCTGTTGAATTGGGGTTGAGACAAGGCTTAGCAAAAGGCTTAGCCATTGGAAGCAATGGTGTTGTCTTTGCTATTTGGGCTTTCATGTCCTATTACGGTAGCAGAATGGTCATGTACCATGGTGGTAAGGGTGGGACTGTATTTGCAGTTGGAGCAGCCATAGCTATCGGTGGATTGGCATTAGGTGCTGGTTTATCCAACGTTAAGTACTTCTCAGAAGCAAGTACATCAGGAGAACGAATAATGGAAGTAATAAAAAGGGTTCCTAAGATTGATTCTGACAATATGGATGGAGAGATTCTAGAGAATGTTTCAGGAGAAGTGGAATTTGACCAGGTTGAATTTGTATACCCATCAAGGCCAGATAGTGTTATTCTAAATGATTTTTGTGTTAAGATTCCAGCAGGGAAAACAGTGGCCTTAGTTGGAGGGAGTGGCTCAGGAAAATCCACTGTGATAGCACTTTTGCAAAGATTTTATGACCCTATTGAGGGAGAGATACGTCTTGATGGTGTGGCTATTCATAAGTTGCAACTCAAATGGTTGAGATCTCAAATGGGTTTGGTGAGTCAAGAACCTGCTTTGTTTGCAACTAGCATTAAGGAGAATATACTTTTTGGAAGAGAAGATGCCACTGAAGAAGAGGTCATGGAAGCTGCCAAAGCTTCCAATGCTCATAATTTCATTTCACAATTGCCACAAGGTTATGATACTCAGGTTGGAGAGAGAGGTGTTCAAATGTCAGGGGGACAAAAACAAAGAATTGCTATAGCACGAGCAATAATAAAAAAGCCAAGAATTCTTTTGTTAGATGAAGCAACAAGTGCACTAGATTCTGAATCTGAAAGAGTTGTGCAAGAAGCTTTAGACAAAGCAACAATAGGACGCACAACCATTATCATTGCACATCGATTATCCACCATTAGAAATGCAAATGAGATTGCTGTTATGCAAAGTGGGAAGATCATGGAGATGGGATCACACCACGAACTTATCCAAAATGAAAATGGTCTTTACACTTCACTAGTTCGCCTCCAACAAACTGAAAAACCAAAAAATGAACAACAGGATACGCTTTCTCACTCTCATCCTTCATCTATATCAAACAAAGACAATCACAACACAAGTAGTCGAAGACTATCTCTTGTAAGTCGATCTAGCTCAGCTAACTCAATAGCTCGTGTTTCACTTGGTGGTGATGATCTTGCTGACGATATTGTAGAAGATAAAAAGCTACCAGTTCCCTCATTTCGAAGGTTACTAGCATTAAACATTCCTGAGTGGAAGCAAGCATGTTTAGGGTGTTTTAATGCAATCTTGTTTGGTGCAATTCAGCCTGTGTATGCATTTGCAATGGGGTCAATGATATCTGTTTATTTTCTCACTGATCATGATGAGATAAAAAAGAAAACGAGGATATATTCACTTTGTTTCTTAGGGTTGTCTATATTCTCATTGGTTGTTAATATCTTCCAACATTATAATTTTGCTTACATGGGAGAGTACTTAACTAAAAGGGTTAGAGAACGAATGCTTTCCAAGATACTCACTTTTGAAGTTGGATGGTTTGATCAAGATGAAAATTCCACAGGTGCTGTTTGCTCTAGACTTGCAAAGGAAGCCAATGTGGTAAGGTCTTTAGTGGGAGATAGAATGGCTCTAGTGGTGCAAACTATTTCTGCTGTGGTGATAGCTTTCACTATGGGCCTAATCATTGCATGGAGGCTTGCCATTGTTATGATAGCTGTTCAACCCATTATCATAGCCTGCTTCTACACAAGACGTGTTCTTCTTAAAAGCATGTCTAGTAAGGCCATTAAGGCCCAAGATGAAAGTAGCAAGATAGCTGCTGAAGCTGTTTCGAACCTTCGAACAATAACTGCCTTTTCCTCCCAAGATAGGATCCTCAAAATGCTTGAAAAGGCCCAAGAAGGCCCAAGTCATGAAAGCATTCGACAATCATGGTTTGCAGGCGTTGGGCTTGCATGTTCCCAAAGCCTCACATTTTGCACCTGGGCATTGGACTTTTGGTACGGTGGAAAGCTTGTTTTTCACGGGTACATCAGTGGAAAAGCATTATTTGAGACTTTTATGATCTTAGTAAGCACAGGTAGGGTTATTGCAGATGCTGGTAGCATGACTAATGACCTTGCCAAAGGAGCTGATGCTGTGGGCTCAGTTTTTGCAATCCTAGATAGGTACACAAAAATTGAGCCTGATGATATTGATGGGTACAAGCCCAAAAAATTAATAGGAAAGATAGAACTTCATGATGTCCATTTTGCATACCCTGCTAGACCTGATGTAATGATTTTCCAAGGATTCTCAATCAAAATTGATGCAGGCAAATCGACAGCATTGGTAGGACAAAGTGGTTCAGGCAAATCAACAATCATTGGCTTAATAGAGAGATTCTATGACCCACTAAAAGGGATTGTGACCATAGATGGTAGAGACATAAAATCATATAATCTTAGGTCACTAAGGAAGCACATTGCTCTTGTAAGTCAAGAACCAACATTGTTTAGTGGGACCATAAGGGAAAATATTGCCTATGGAGCATCTAATAAGATTGATGAAGCTGAGATCATAGAAGCATCAAGGGCAGCCAATGCTCATGATTTCATTGCAAGCCTAAAGGATGGTTATGACACACAATGTGGAGATAGAGGAGTACAACTCTCTGGAGGTCAAAAGCAAAGAATTGCAATAGCTAGAGCCATATTGAAGAACCCAGAGGTGTTACTGCTTGATGAAGCCACTAGTGCCCTTGATAGCCAATCAGAGAAATTGGTGCAAGATGCTTTAGAAAGGGTCATGGTGGGGAGGACCAGTGTAGTGGTAGCTCATAGGTTGAGCACAATACAAAATTGTGATCTAATTGCTGTGTTAGACAAGGGAAAGGTGGTGGAAAAAGGGACTCACTCATCTTTATTGGCAGAAGGACCAAGTGGAGCTTATTACTCTTTGGTCAGTCTTCAAAGAAGACCAACCAATATGATTAGTAATTCTACACAAGAAATTAGCTAA 3768 0.4071 MGGDQKSDVSMVGKKNKRNGSFRSIFMHADGIDWFFMILGVVGAVGDGLGTPLVLFITSHIMNNIGDFSGSIGSTFLHSINKNAKVLLYLACGSFVACFLGERQAARMRARYLKAVLRQEVAYFDLHVTSTSEVITSVSNDSLVIQDVLSEKVPNFLMNASMFVGSYIVAFALLWRLAIVGFPFVALLVIPGFMYGRTLMGLASKIREEYNKAGTIAEQAISSIRTVYSFVGESKTIDAFSDALQGSVELGLRQGLAKGLAIGSNGVVFAIWAFMSYYGSRMVMYHGGKGGTVFAVGAAIAIGGLALGAGLSNVKYFSEASTSGERIMEVIKRVPKIDSDNMDGEILENVSGEVEFDQVEFVYPSRPDSVILNDFCVKIPAGKTVALVGGSGSGKSTVIALLQRFYDPIEGEIRLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATEEEVMEAAKASNAHNFISQLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERVVQEALDKATIGRTTIIIAHRLSTIRNANEIAVMQSGKIMEMGSHHELIQNENGLYTSLVRLQQTEKPKNEQQDTLSHSHPSSISNKDNHNTSSRRLSLVSRSSSANSIARVSLGGDDLADDIVEDKKLPVPSFRRLLALNIPEWKQACLGCFNAILFGAIQPVYAFAMGSMISVYFLTDHDEIKKKTRIYSLCFLGLSIFSLVVNIFQHYNFAYMGEYLTKRVRERMLSKILTFEVGWFDQDENSTGAVCSRLAKEANVVRSLVGDRMALVVQTISAVVIAFTMGLIIAWRLAIVMIAVQPIIIACFYTRRVLLKSMSSKAIKAQDESSKIAAEAVSNLRTITAFSSQDRILKMLEKAQEGPSHESIRQSWFAGVGLACSQSLTFCTWALDFWYGGKLVFHGYISGKALFETFMILVSTGRVIADAGSMTNDLAKGADAVGSVFAILDRYTKIEPDDIDGYKPKKLIGKIELHDVHFAYPARPDVMIFQGFSIKIDAGKSTALVGQSGSGKSTIIGLIERFYDPLKGIVTIDGRDIKSYNLRSLRKHIALVSQEPTLFSGTIRENIAYGASNKIDEAEIIEASRAANAHDFIASLKDGYDTQCGDRGVQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSEKLVQDALERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGKVVEKGTHSSLLAEGPSGAYYSLVSLQRRPTNMISNSTQEIS* 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0150 1255 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 684 965 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr6g0150 1255 MobiDBLite consensus disorder prediction 595 626 - -
Apr6g0150 1255 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 22 1245 IPR039421 -
Apr6g0150 1255 Gene3D - 352 612 IPR027417 -
Apr6g0150 1255 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 100 319 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr6g0150 1255 CDD ABC_6TM_Pgp_ABCB1_D2_like 667 983 - -
Apr6g0150 1255 CDD ABC_MTABC3_MDL1_MDL2 354 592 - -
Apr6g0150 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 354 590 IPR003439 GO:0005524
Apr6g0150 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 993 1240 IPR027417 -
Apr6g0150 1255 SUPERFAMILY ABC transporter transmembrane region 29 338 IPR036640 GO:0005524|GO:0016021
Apr6g0150 1255 SMART AAA_5 1027 1220 IPR003593 -
Apr6g0150 1255 SMART AAA_5 381 673 IPR003593 -
Apr6g0150 1255 Gene3D - 990 1248 IPR027417 -
Apr6g0150 1255 Gene3D ABC transporter type 1, transmembrane domain 95 974 IPR036640 GO:0005524|GO:0016021
Apr6g0150 1255 Pfam ABC transporter transmembrane region 678 946 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr6g0150 1255 Pfam ABC transporter transmembrane region 37 297 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr6g0150 1255 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 327 - -
Apr6g0150 1255 ProSitePatterns ABC transporters family signature. 1140 1154 IPR017871 GO:0005524
Apr6g0150 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1000 1237 IPR003439 GO:0005524
Apr6g0150 1255 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 22 1245 - -
Apr6g0150 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 346 592 IPR027417 -
Apr6g0150 1255 ProSitePatterns ABC transporters family signature. 493 507 IPR017871 GO:0005524
Apr6g0150 1255 MobiDBLite consensus disorder prediction 604 626 - -
Apr6g0150 1255 CDD ABC_MTABC3_MDL1_MDL2 1000 1240 - -
Apr6g0150 1255 Pfam ABC transporter 372 521 IPR003439 GO:0005524
Apr6g0150 1255 Pfam ABC transporter 1019 1168 IPR003439 GO:0005524
Apr6g0150 1255 SUPERFAMILY ABC transporter transmembrane region 657 984 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0150 Apr-Chr6 1415547 1422734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0150 14 1241 Calmodulin-binding Proteins AT2G36910 45.236 0.0 1062
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0150 K05658 - gmx:100807709 2114.73