Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0141 ATGGATCTGGTCTTGAATTGCCTAAATACCACTACCATTGCACTCTTTTCTCTAATTGTTCTCTGTCTCTTTCTCTATCGTCGTTCCAAAGGTAGAGAGGCTCCAACAGTTTCAGGTGCATGGCCAATACTTGGTCACCTTAAATTGTTGAGTGCTTCACAAACACCCCACAGAACCATAGGTGCTTTGGCTGACAAGTATGGACCCTTATTCACCATCAAACTCGGTGTCAAACCCGCTTTGGTACTCAGCAATTGGGAAATGGCTAAAGAATGTTTCACCACGAACGACATTGCCGTTTCCTCTCGCCCAAAGCTTGTTGCCGTTGAACTCATGTCATACAACCAAGCCTTCGTGGGGTTGGCACCGTACGGATCGTATTGGCGTGAATTGCGTAAAATTGTTACCTTTGAGTTTCTCTCAAACCGTCGAATTGAGCAACTGAGCCACGTGCGTGTCTCCGAGGTTCAAACTTCGATTAAAGAGCTCTTTAATGTTTGGCGTAGTAAAAAGAACGAGTCTAACTATGCCTTGGTGGAGATGAAGCAATGGTTTGCACACTTAACTTTCAATATGGTTATTCGAATGGTTGCTGGCAAGAGATATTTTGGTGCTATGGATGAGGCCAACGAAGAAAAAGCAAAGAGGTTTATGGAAAATATAAGAGAGTTCATGCGTTTGATGGGTACTTTTACGGTGGCTGATGGTGCTCCTTTTCTAAGGTGGCTTGATTTGGGGGGCTATGAGAAGGCCATGAAAGCAACTGCCAAAAAATTTGACAAAGTGTTGAGTGAGTGGTTGGAAGAGCACAAACAAAACAAGGCATTGGGTGGAAAGGCTGAAGGGGACCGAGACTTTATGGATGTTATGCTTTCGGCACTTAATGGAACACAAATTGATGGGTTTGATGCTGACACCATTTGCAAAGCCACTACTTTGGAATTGTTTTTGGGAGGAACTGATACCACTGCTGTTACCCTTACGTGGGCACTATGTTTGTTATTGAGAAGTCCTCATGTATTGGAAAAAGTTAAAGAAGAAATTAACATGCATTTTGGAAAAGAGGGAAGCATAGGGGAATCAGATATAAATAAACTTGCGTATCTTCAAGCTGTGGTTAAAGAGACACTAAGATTGTATCCACCAGCTCCGCTATCATCACCTCGTGAATTCACTGAGAATTGTACTATTGGTGGTTACCATGTTAAAAAGGGAACTCGGTTGATTCCAAATTTGTGGAAGATTCATAGAGATCCTAGTGTTTGGTCAGATCCATTAGAGTTCAAACCAGATAGGTTTCTTACCACTCATAAACATGTTGATGTTAGGGGCCAAAATTTTGAGTTTCTACCATTTGGAAGTGGGAGAAGGATTTGTCCTGGAATGTCCCTTGGTCTACATATGGTCGATTTCACTCTAGCTAATTTCTTGCATTCCTTTGAAATCATGAATCCATCAAGTGAACCTATTGATATGACTGAGATCTTTGGATTCACCAACACCAAAGCTACTCCACTTGAGATTTTGGTTAAACCACATTTGCCTCTCAACTATTATGAAGGTTTATAA 1569 0.4168 MDLVLNCLNTTTIALFSLIVLCLFLYRRSKGREAPTVSGAWPILGHLKLLSASQTPHRTIGALADKYGPLFTIKLGVKPALVLSNWEMAKECFTTNDIAVSSRPKLVAVELMSYNQAFVGLAPYGSYWRELRKIVTFEFLSNRRIEQLSHVRVSEVQTSIKELFNVWRSKKNESNYALVEMKQWFAHLTFNMVIRMVAGKRYFGAMDEANEEKAKRFMENIREFMRLMGTFTVADGAPFLRWLDLGGYEKAMKATAKKFDKVLSEWLEEHKQNKALGGKAEGDRDFMDVMLSALNGTQIDGFDADTICKATTLELFLGGTDTTAVTLTWALCLLLRSPHVLEKVKEEINMHFGKEGSIGESDINKLAYLQAVVKETLRLYPPAPLSSPREFTENCTIGGYHVKKGTRLIPNLWKIHRDPSVWSDPLEFKPDRFLTTHKHVDVRGQNFEFLPFGSGRRICPGMSLGLHMVDFTLANFLHSFEIMNPSSEPIDMTEIFGFTNTKATPLEILVKPHLPLNYYEGL* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0141 522 SUPERFAMILY Cytochrome P450 40 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 Pfam Cytochrome P450 38 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PANTHER CYTOCHROME P450 82A3 1 521 - -
Apr6g0141 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Apr6g0141 522 Gene3D Cytochrome P450 24 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0141 522 PANTHER CYTOCHROME P450 82C3-RELATED 1 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0141 Apr-Chr6 1335024 1336915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0141 8 514 Cytochrome P450 AT4G31940 47.206 7.67e-176 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0141 - - gmx:100789386 838.18