Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0140 ATGGATTTAGTCTTGAATTGCCTAAATACCATTACACTCTTTTCTCTAATTGTTCTCTGTCTCTTTCTCTATCGTCGTTCCAAAGGTAGAGAGGCTCCAACAGTTTCAGGTGCATGGCCAATACTTGGTCACCTTAAATTGTTGAGTGCTTCACAAACACCCCACAGAACCTTAGGTGCTTTGGCTGACAAGTATGGACCCTTATTCACCATCAAACTCGGTGTCAAACCCGCTTTGGTGCTCAGCAATTGGGAAATGGCTAAAGAATGTTTCACCACAAACGACATTGCCGTTTCCTCTCGGCCAAAGCTTGTTGCTGTTGAACTCATGTCGTACAACCAAGCTTTCGTGGGGTTGGCACCGTACGGATCGTATTGGCGTGAATTGCGTAAAATTGTTACCTTTGAGTTTCTCTCAAACCGTCGAATTGAGCAACTGAGCCACGTGCGTGTCTCCGAGGTTCAAACTTCGATCAAAGAGCTATTTAACGTTTGGTGTAGTAAAAAGAATGAGTCTAACTATGTGCTGGTGGAGATGAAGCAATGGTTTGTGCATATAACTTTCAATATGGTTCTTCGAATGGTTGCTGGCAAGAGATATTTTGGTGCCATGGATGAGGCCAACGAAGAAAAAGCAAAGAGGTTTCTGGAAAATATAAGAGAGTTCATGCGTTTGATGGGTACTTTTACGGTGGCTGATGGTGCTCCTTTTCTGAGGTGGCTTGATTTGGGGGGCTATGAGAAGGCCATGAAAGAAACTGCCAAAAAATTTGACGAAGTGTTGAGTGAATGGTTGGAGGAGCACAAACAGAACAAGTCTCTGGGTAGAAAGGTTGAAAGCCATCGAGATTTCATCGATGCGATGCTTTCGGCACTTAATGGAATACAAATTGATGGGTTTGATGCTGACACCATTTGCAAAGCCACAACTTTGGAAATAATTTTGGGAGGAACTGACTCAACCTTTACCACCCTTACATGGGCATTGAGTTTATTATTGAGAAATCCTCTTGTATTGAAAAAGGCTAAAGAAGAGATTGACACACAAATTGGAAAAGACAGATGCCTAAGTGAGTCAGATATAAATAAACTTGTGTATCTTCAAGCTATAGTTAAAGAGACACTAAGATTGTATCCACCAGCTCCTCTCTCATCACCTCGTGTATTCACTGAGAATTGCACCTTGGGTGGTTACCATGTCAAAAAGGGAACTCGACTAATCCCAAACCTGTGGAAGATTCATAGAGACCCAAGTGTTTGGTCAGATCCATTGGAGTTCAAACCAGAAAGGTTCCTTACCACTCACAAAAATGTTGATGCCAGGGGTCATCATTTTGAGTTGTTACCATTTGGAAGTGGGAGACGAATCTGTGCTGGAATGTCCCTTGGCATGAATATGGTTCATTTCACTTTGGCTAATTTATTGCATTCCTTTGAAATACTGAATCCCTCGAGTGAACCTGTTGACATGACTGAAATATTTGAATTCACCAACACAAAAGTTACTCCGCTTGAGGTTTTGATTAAACCACGTTTATCTTCCAACTATTATGAAACATTGTAA 1563 0.4165 MDLVLNCLNTITLFSLIVLCLFLYRRSKGREAPTVSGAWPILGHLKLLSASQTPHRTLGALADKYGPLFTIKLGVKPALVLSNWEMAKECFTTNDIAVSSRPKLVAVELMSYNQAFVGLAPYGSYWRELRKIVTFEFLSNRRIEQLSHVRVSEVQTSIKELFNVWCSKKNESNYVLVEMKQWFVHITFNMVLRMVAGKRYFGAMDEANEEKAKRFLENIREFMRLMGTFTVADGAPFLRWLDLGGYEKAMKETAKKFDEVLSEWLEEHKQNKSLGRKVESHRDFIDAMLSALNGIQIDGFDADTICKATTLEIILGGTDSTFTTLTWALSLLLRNPLVLKKAKEEIDTQIGKDRCLSESDINKLVYLQAIVKETLRLYPPAPLSSPRVFTENCTLGGYHVKKGTRLIPNLWKIHRDPSVWSDPLEFKPERFLTTHKNVDARGHHFELLPFGSGRRICAGMSLGMNMVHFTLANLLHSFEILNPSSEPVDMTEIFEFTNTKVTPLEVLIKPRLSSNYYETL* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0140 520 Gene3D Cytochrome P450 22 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PANTHER CYTOCHROME P450 82A3 6 519 - -
Apr6g0140 520 Pfam Cytochrome P450 36 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Apr6g0140 520 SUPERFAMILY Cytochrome P450 38 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PANTHER CYTOCHROME P450 82C3-RELATED 6 519 - -
Apr6g0140 520 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0140 520 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0140 Apr-Chr6 1330217 1332231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0140 32 517 Cytochrome P450 AT4G31940 49.696 2.62e-174 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0140 - - gmx:100789386 849.736