Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0135 ATGAACGGGTCTGGAATCTTCTTTTGTCTTAGGCTCCAAGCCATTGCCAAACCTATAAATACACGCATTCTTTTCTTCTCTTCTTCCTATTCAATTCATATTTATCTTCTTTCGTTCTTTCACACAACTCAGAATCCTAATCAATCCATGGCATCAGGTGCAACAGAAGCTTTTCCAGATTTGGGTAAACACTGCCAGCACCTCCATTGTAACCAACTCGATTTCCTTCCTTTCACCTGCGACGGTTGCAAGCAGGTGTTTTGTTTGGAACACAGATCCTACAAGTCACACGCGTGCCCAAAATCCGACCACAACAGCAGAAAAGTGATTGTCTGTGAAACATGTTCCATGTCCATCGAGACAACCGGCCACGTGGGACAAGACGAGGAAGCAATCTTGGAGAGGCATCACAACTCTGGAAACTGTGACCCCAACAAGAAGAAGAAACCCCTTTGCCCCGTAAAGCGATGCAAGGAGGTTTTATCGTTTTCTAATACCAGTACTTGTAAAACTTGCCATGTGAAGGTGTGCCTCAAGCACCGTTTCCCTAGTGATCATTCTTGTAGCAGAGGAGCTTCAGCTTCCTCTTCTTCTGCTGTTGCTAATGGGCGGTGGAATAATCGGTTCTTGGCCTCTTTGGCTTCAAGGAGAGGACAAGACTGTGCTAAGAATGCACCTCGTTCTACTTCTCCTCCTAGTACTCCGTCTGTTAAGGCCTATTGA 723 0.4564 MNGSGIFFCLRLQAIAKPINTRILFFSSSYSIHIYLLSFFHTTQNPNQSMASGATEAFPDLGKHCQHLHCNQLDFLPFTCDGCKQVFCLEHRSYKSHACPKSDHNSRKVIVCETCSMSIETTGHVGQDEEAILERHHNSGNCDPNKKKKPLCPVKRCKEVLSFSNTSTCKTCHVKVCLKHRFPSDHSCSRGASASSSSAVANGRWNNRFLASLASRRGQDCAKNAPRSTSPPSTPSVKAY* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0135 240 MobiDBLite consensus disorder prediction 222 240 - -
Apr6g0135 240 SUPERFAMILY AN1-like Zinc finger 144 197 IPR035896 -
Apr6g0135 240 ProSiteProfiles Zinc finger AN1-type profile. 146 196 IPR000058 GO:0008270
Apr6g0135 240 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 55 211 - -
Apr6g0135 240 SMART AN1_Zf_4 65 104 IPR000058 GO:0008270
Apr6g0135 240 SMART AN1_Zf_4 152 193 IPR000058 GO:0008270
Apr6g0135 240 SUPERFAMILY AN1-like Zinc finger 56 107 IPR035896 -
Apr6g0135 240 Pfam AN1-like Zinc finger 65 102 IPR000058 GO:0008270
Apr6g0135 240 Pfam AN1-like Zinc finger 152 190 IPR000058 GO:0008270
Apr6g0135 240 ProSiteProfiles Zinc finger AN1-type profile. 59 107 IPR000058 GO:0008270
Apr6g0135 240 MobiDBLite consensus disorder prediction 217 240 - -
Apr6g0135 240 Gene3D - 128 205 IPR035896 -
Apr6g0135 240 Gene3D - 49 118 IPR035896 -
Apr6g0135 240 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 55 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0135 Apr-Chr6 1263229 1265795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0135 50 221 C2H2 Transcription Factor Family AT3G28210 62.791 4.08e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0135 - - aprc:113867149 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0135 6 1263229 1265795 Apr6g0135 6 1263229 1265795 ECH