Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0133 ATGGCAATGTCATGTTCACTCTTCTTCTTGACGCTCTTCTTCTTCACAACACCTTCACAAGCTAGACTCACTTTGGATTTCTACAAGGACTCGTGTCCCCAATTCAGCAAGATCATCCAAGACACTGTCACATCCAAGCAGATCTCCAGCCCCACCACCGCCCCCGCCACGCTCCGCCTCTTCCTCCACGATTGTCTCCTCCCCAACGGCTGCGATGCTTCCGTTCTCCTCTCCTCCACCGCCTTCAACACCGCCGAACGCGACGCTGACATCAACCTCTCCCTCCCCGGCGACGCCTTCGACCTCGTCGTCCGCGCCAAGACCGCCCTCGAACTCGCCTGTCCCAACACCGTCTCCTGCGCCGATATCCTCTCCGCCGCCACGCGCGACCTCCTCATCATGCTTGGCGGCCCCTACTTCCCCCTCTACCTCGGCCGCCGCGACGGTCGCATCTCACGGGCGGCCTCCGTCGCCGGCCACCTCCCCAAACCCTCGATGCCAATCTCCCAAATCACCGAAATCTTCACCCAACGCGGCTTCTCCGTGGAAGAATTCGTGGCTCTCAGTGGGGCCCACACCGTCGGGTTCTCCCATTGCTCCGAATTCATCTCCGACATCAACACCAACTACACTTCTTATTCTTCCCAATATAACCCTCGTTTCGCTCAGGGGCTTCAAAGGGCTTGCGCTGATTACAAAAAGAACCCTACCTTGTCAGTGTTCAACGATGTTATGACACCTAACAAGTTCGATAACGTTTACTTCCAGAACCTTCCAAAGGGTTTGGGTGTGTTGAAATCGGATCATGGGTTGTACAATGACCCTATTACTAGACCCTTTGTTGAGAACTTTGCTAAGGATCAAAATAGGTTCTTTCAGGTCTTTGGTAAGGCAATGCAGAAGCTTAGTCTCTTGGGCGTTCAAACTGGGAGAAAGGGTGAGATCAGACGCAGGTGTGATCAGGTTAATTGA 972 0.5432 MAMSCSLFFLTLFFFTTPSQARLTLDFYKDSCPQFSKIIQDTVTSKQISSPTTAPATLRLFLHDCLLPNGCDASVLLSSTAFNTAERDADINLSLPGDAFDLVVRAKTALELACPNTVSCADILSAATRDLLIMLGGPYFPLYLGRRDGRISRAASVAGHLPKPSMPISQITEIFTQRGFSVEEFVALSGAHTVGFSHCSEFISDINTNYTSYSSQYNPRFAQGLQRACADYKKNPTLSVFNDVMTPNKFDNVYFQNLPKGLGVLKSDHGLYNDPITRPFVENFAKDQNRFFQVFGKAMQKLSLLGVQTGRKGEIRRRCDQVN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0133 323 PANTHER PEROXIDASE 31 6 323 - -
Apr6g0133 323 Gene3D - 26 323 - -
Apr6g0133 323 CDD secretory_peroxidase 23 322 IPR033905 GO:0004601|GO:0042744
Apr6g0133 323 Pfam Peroxidase 45 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PANTHER - 6 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 ProSiteProfiles Plant heme peroxidase family profile. 22 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 Gene3D Peroxidase, domain 2 162 302 - -
Apr6g0133 323 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0133 323 SUPERFAMILY Heme-dependent peroxidases 23 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0133 Apr-Chr6 1250629 1251631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0133 19 323 Peroxidase AT5G40150 66.885 5.51e-156 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0133 K00430 - gmx:100817030 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0133 6 1250629 1251631 Apr6g0133 6 1250629 1251631 ECH
Apr3g0839 3 21844477 21845472 Apr6g0133 6 1250629 1251631 ECH