Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0118 ATGCATGGGTCCGGTGGTGAGGAGTGGAAACAGAGCCGGCACATGTGGCCTGTACCTTCCAACGCGACCACTGTAGCCCCCGATTCTTCACCGTCTGAATTTTTATGCAAAGATGGACGCAAGATTCGTGTTGGTGATTGTGCACTTTTCAAGCCACCCAGGGACTCCCCTCCTTTTATAGGAATAATTCGCAAGTTAACGTTTGATAGAGAAGAAAGTCCAAGTTTAGAAGTGAATTGGCTTTACCGACCTGCTGATTTGAAGCTTGCTAAAGGGATTGTGCTGGAAGCTGCACCAAACGAAGTTTTCTACTCCTTTCACAAGGATGAAACACCTGCTGCATCATTACTTCATCCGTGTAAAGTAGCATTTCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCTGCATTTGTCTGTAGACGAGTTTATGACATTGAGAACAATTGTTTATGGTGGCTAACTGATAAGGACTACCTTAATGAAGAAGTTAACCAGCTATTAGACAAGACAAAACTAGAAATGCATGGGGCTGTGCAGTCAGGAGGCCGTTCTCCGAAACCCTTGAATGGTCCAACATCAACACAGTCATTGAAATCTGGTTCTGACAACGTTCAAAGCAGTTCTTCCTTTAGTGCACAGGGTAAGGGCAAAAAGAGAGAGCGGGTTGATCAGGGATCTGATTCATCTAAAAAAGAGCGCTTATTTAAGGTAGAAGATGGAGATTCTGGTCAATTTAGGCTGGAGAGCATGTTAAAGTCTGAGATTGCTAAAATAACTGATAAAGGTGGGCTCGTGGACTTTGAAGGAGTTGAAAGGCTGGTACAGCTCATGCAACCTGATAGTGCTGATAAAAAAATAGATTTGGCTGGGCGGATAATGCTTGTTGATGTAATAGCACTTACAGACCGGTATGACTGTCTTGGCTGGTTTGTCCAGCTCAGGGGTTTGCCTGTGTTGGATGAATGGCTGCAAGAGGTTCATAAGGGAAAAATTGGTGATGGAAATATGCCTAAAGAAAGTGATAAGTCGGTTGAAGAATTTCTTTTAGCTTTACTTCGTGCTTTGGATAAGCTTCCTGTGGACCTTCATGCACTACAAACCTGTAACGTTGGAAAGTCTGTTAATTATTTACGCACCCACAAAAATTCTGAAATTCAGAAGAAAGCTAGGAGTTTAGTAGACACGTGGAAGAGGCGTGTGGAAATTGAAATGAATATGACTGATTCAAAGACTGGTTCAACCCGCACTGTTTCTTGGCCAGCAAAGCCAGCAGCTTCTGACACTCCTCATGTTGGAAATAGGAAAACAGGAGGGTCCTCTGAGAATGTTGCAAAGAGTTCAGCAATTCAGCCCTCAATATCGAAAAATTCCCAAGCTAAGCTAAGTTCTGGAGAAGCATTGTCCAAGTCCTCTGCATCCCCTGGCTCAACAAAATCCATGAATACCTCAGCGGGCAGTAACTCAAAAGATCAAAACATTAAAGTCTTGGTTGGAGCCACAACGTCAGATCTACCGCTGACACCTATCAAGGAGGAGAGGAGCAGCAGCTCTAGTCAATCTCAAAATAACAGCATATCTTGTTCTAGTGAACATGCTAAAACTATTGGTTCTTGTAGGGAAGATGCAAAAAGCTCTACTGCAATGTCAACGGGTGCGAGCAAACTTCCTGGGGGTGCATCTCGAACTCGGAAGTCAAGCAACGGTTTACATGGTGCTGGTGTTGCAGTAGTACAAAAGGAGCACAGCTCTGCAAAAAATTCTACTAGAAGTTCACCTTCTGACAAAGTATCACCTACTCGAGTGTCCCATGAAAAATCAGCTGACCAGCCGCTTCCTGATCAAGGGAGCAATCAGCGACTGATTCTCAGGTTGCCAAACACTGGTCGCAGTCCTTCAAGGGGAGCTAGTGGGGGTTCTTTTGAAGAACCAGCTACTATGTGCAGCAAAGCATCGCCACCTGCTGACAAGAATGAAAATCAGGACAGAAGAGTGAAAACTAAACCTGATTGTTTGCAGTCTCATGTTGTGTCAAATACAGCAAATGATGCATGTGATGCTAATGAAGCCTTGATTGGTGTTGACGAAGGTAAGGGCTCTCCGATGGTTGATGAGCGCTGCAGGGCAAATGAAGATGGTGATAAAGTAGAAGAAGCATCAAAACCAACTAGTTCTTCATCTGGCTTTGTTTCCAGATCAGGGCAGACGTATGATGCTTCATTAAGCCCGATGAATGCATTGGTTGAAAGCTGTGTGAAAATTTCTGAAGCAAGTGCATCTGTGTCCCTTGGTGATGATGGAATGAACCTACTAGCTACTGTGGCTGCTGGGGAAATATCCCGATCTGAAAATGCCTCACCGATGGTATCCCCTGAGAGGAAGTCTCCTGCAGCAGACGAATCGAGCTCCGGCAATGATTTCAAGTTAAAACATTCTGGTGAAGCTGCTACACGCACTCTTGCACAATCTGACAGTGGGGCTACTGGAGAGCACCCTTTGAATACTGTTGATTCATTGCAAATCAAAAGTGATTCAAGGCATCCTGCGACAACGTCACATGATTTTTCAGGAGATGGTGAAGCTATTTCTTCCAGTTGTATAGAGAAAACCGGTGATGGTAGAACTCAAATAAATATCTCTGGTACAGATTTGATACAAAATGCTGAGGGTCCATGTTTGCGGACCGAAACCAAAGAGGATGCTTCTGAAACTATTTTGCCAGCTAAAAAGGAGACTGACGCAGACCCAGGAGGTTCAGACTCTAAACTAAAGTCAAGGACATCCTCTTTTGATGAGGACCAGAAGGTGGATCACATGGATGAAGGAATCATAGAGAATGAGAAAATGTTGGCTTCAAAAGCTGTTGCTAGTGTTGAGATTGAAAATGAAGTAGATGAAAAACCACCTGAATTATCTTCAGGAGTAGATAATGAAAACCAGATTGGTGCAGAGAAAATGACAGGTACTGGTATACTAGTGCAGAAGCCCCCTTCAGTTGCAGAAAACTGCGAGTCTGTTGATTTTAAAAAGGAGTCACCTGCTTCTGGTAATGCTTTAATGGTATCAAGGGATGAAAATGCCAACGACATGAAATCAGTTGAAATTGTGCCTGATGAAAAGCGAAATGAACTGGTTTCATCAGTTTCCAATGATGGTACTGAATGTGCTGAAGATAATTTGGATAGAAAAGAGGCTATTGGCCACTGTTCTGGCTCATCAGTTCTCCCAGATTTACCGACAATTGCTGGGAAAGAGAATGAAGTGCACAAATCATCTGAGCGTAAGGTAGATGGAAATCAATCTGAGGTTGCTGGAGAGTGGCAAGCATGCAGTGTTAATCCATCTCTTACTGCTGCTGGGTCTGATACTGCAGTAAAGCTGGACTTCGATTTAAACGAAGGCTTTCCTGTTGATGATGTTAGCCAAGGGGAGATTGCTAGACAGGAAGAACCTATCACATCATCTGCCATTCATGTTCCTTGCCCCTTGCCTTTTCCCATTTCGTCCATCTCTGGAGGCTTCCATGCTTCAATTACAGTGGCGTCTGCTGCCAAAGGACCGGTTGTTCCACCAGAGAACCCATTACGGAGTAAGGGAGAACTTGGATGGAAAGGGTCTGCTGCTACAAGTGCATTCCGGCCAGCTGAACCTAGGAAAAATGCAGAGACACCATCAAATACTAATGATGTTCCTTCTGTTGATGCCACTTTTATCAAACAAGGTCGGCCTCCTTTAGATTTTGATTTAAATGTGCCAGATGAAAGAAGTTTTGAGGATGCTGCTTCCCGTGGTTCTTTGGAATCTGGACCTCATGATCGCAACACTGTGGGACTTGATCTTGATTTGAACAGAGTTGATGAGACTCCTGAAGGTGGCACATTCGGCGTGAGCAAACTGGATGTTCCTTCTTTACCAAGTAAGCCTTCGTTGTCCAGTGGGTTATCTAACGGGGGAAGTGTCTCAAGAGACTTTGATTTAAATAATGGGCCAGGCCTTGATGAAGTTGTCAGCGAAGTCCCATCACATAGTCAGCACATGAAAAGTTCTGTGCCATTTCCAACTGCTGTTCATGGCACAAGAACAAATAATACAGAATTTGGGAATTATTCTGCGTGGTTTCCTCCAGGCAATTCTTATTCTGCGATTACTGTCCCGCCACTTCTGTCTGGTAGAGGGGAGCAGAGTTATGTATCTGGTGCTGGGGCACAAAGGATAATGGGTCCCACGGGGAGCACTCCTTTTGGTCCTGAGATCTACAGGGGTCCGGTGCTTTCATCCTCTCCAGCTGTTGCTTATCCACCCACAACACCCTTTCCGTATCCAGGATTTCCATTTGAAACCAATTTTCCATTATCCTCAAACTCCTTTTCTGGTTGTTCAACAGCATTTATGGATTCCTCAACTGTGGGCGGACTATGCTTTCCTACCATGCCCTCACAGCCAGTTGGGCCTGGTGGGGTTGTATCATCCTCATTTCCCCGTCCCTATGTTATGAGTCTTCCAGGTGGCACAAGTAATGTGATACCTGACAGTAGAAAATGGGGAAGCCAAAGTCTGGATCTTAATTCTGGCCCTGGTGGTACAGATACAGAGCGGAGAGATGATAGATTGCCATCAGGATTGAGGCAAATGTCTGTCCCCAATTCACAAGCATCAATGGAGGATCATTTGAAGATGTTTCAGATGGCAGGTGCATTAAAAAGAAAGGAACCTGATGGTGGTTGGGATGGAGCTGATAGATTCAGTTACAAGCAACCCTCATGGCAGTAG 4770 0.4455 MHGSGGEEWKQSRHMWPVPSNATTVAPDSSPSEFLCKDGRKIRVGDCALFKPPRDSPPFIGIIRKLTFDREESPSLEVNWLYRPADLKLAKGIVLEAAPNEVFYSFHKDETPAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIENNCLWWLTDKDYLNEEVNQLLDKTKLEMHGAVQSGGRSPKPLNGPTSTQSLKSGSDNVQSSSSFSAQGKGKKRERVDQGSDSSKKERLFKVEDGDSGQFRLESMLKSEIAKITDKGGLVDFEGVERLVQLMQPDSADKKIDLAGRIMLVDVIALTDRYDCLGWFVQLRGLPVLDEWLQEVHKGKIGDGNMPKESDKSVEEFLLALLRALDKLPVDLHALQTCNVGKSVNYLRTHKNSEIQKKARSLVDTWKRRVEIEMNMTDSKTGSTRTVSWPAKPAASDTPHVGNRKTGGSSENVAKSSAIQPSISKNSQAKLSSGEALSKSSASPGSTKSMNTSAGSNSKDQNIKVLVGATTSDLPLTPIKEERSSSSSQSQNNSISCSSEHAKTIGSCREDAKSSTAMSTGASKLPGGASRTRKSSNGLHGAGVAVVQKEHSSAKNSTRSSPSDKVSPTRVSHEKSADQPLPDQGSNQRLILRLPNTGRSPSRGASGGSFEEPATMCSKASPPADKNENQDRRVKTKPDCLQSHVVSNTANDACDANEALIGVDEGKGSPMVDERCRANEDGDKVEEASKPTSSSSGFVSRSGQTYDASLSPMNALVESCVKISEASASVSLGDDGMNLLATVAAGEISRSENASPMVSPERKSPAADESSSGNDFKLKHSGEAATRTLAQSDSGATGEHPLNTVDSLQIKSDSRHPATTSHDFSGDGEAISSSCIEKTGDGRTQINISGTDLIQNAEGPCLRTETKEDASETILPAKKETDADPGGSDSKLKSRTSSFDEDQKVDHMDEGIIENEKMLASKAVASVEIENEVDEKPPELSSGVDNENQIGAEKMTGTGILVQKPPSVAENCESVDFKKESPASGNALMVSRDENANDMKSVEIVPDEKRNELVSSVSNDGTECAEDNLDRKEAIGHCSGSSVLPDLPTIAGKENEVHKSSERKVDGNQSEVAGEWQACSVNPSLTAAGSDTAVKLDFDLNEGFPVDDVSQGEIARQEEPITSSAIHVPCPLPFPISSISGGFHASITVASAAKGPVVPPENPLRSKGELGWKGSAATSAFRPAEPRKNAETPSNTNDVPSVDATFIKQGRPPLDFDLNVPDERSFEDAASRGSLESGPHDRNTVGLDLDLNRVDETPEGGTFGVSKLDVPSLPSKPSLSSGLSNGGSVSRDFDLNNGPGLDEVVSEVPSHSQHMKSSVPFPTAVHGTRTNNTEFGNYSAWFPPGNSYSAITVPPLLSGRGEQSYVSGAGAQRIMGPTGSTPFGPEIYRGPVLSSSPAVAYPPTTPFPYPGFPFETNFPLSSNSFSGCSTAFMDSSTVGGLCFPTMPSQPVGPGGVVSSSFPRPYVMSLPGGTSNVIPDSRKWGSQSLDLNSGPGGTDTERRDDRLPSGLRQMSVPNSQASMEDHLKMFQMAGALKRKEPDGGWDGADRFSYKQPSWQ* 1590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0118 1589 CDD TFIIS_I 326 402 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 581 598 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 175 235 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 1185 1233 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 407 422 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 699 719 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 433 493 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 16 30 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 1257 1320 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 186 214 - -
Apr6g0118 1589 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 1589 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 505 669 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 508 568 - -
Apr6g0118 1589 Gene3D - 25 246 IPR043151 -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 893 938 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 1007 1055 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 695 737 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 1 32 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 406 493 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 215 235 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 888 938 - -
Apr6g0118 1589 Pfam TFIIS helical bundle-like domain 352 401 IPR017923 -
Apr6g0118 1589 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 269 404 IPR035441 -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 1083 1100 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 1504 1525 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 610 635 - -
Apr6g0118 1589 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1589 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 1568 1589 - -
Apr6g0118 1589 Pfam BAH domain 41 147 IPR001025 GO:0003682
Apr6g0118 1589 MobiDBLite consensus disorder prediction 1304 1320 - -
Apr6g0118 1589 SMART TFS2_5 324 403 IPR003617 GO:0005634
Apr6g0118 1589 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 306 414 IPR035441 -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 1067 1100 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 1503 1554 - -
Apr6g0118 1589 ProSiteProfiles TFIIS N-terminal domain profile. 318 404 IPR017923 -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 720 737 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 781 809 - -
Apr6g0118 1589 MobiDBLite consensus disorder prediction 1027 1045 - -
Apr6g0118 1589 ProSiteProfiles BAH domain profile. 40 155 IPR001025 GO:0003682
Apr6g0118 1589 MobiDBLite consensus disorder prediction 842 866 - -
Apr6g0118 1589 SMART BAH_4 40 155 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0118 Apr-Chr6 1139204 1147512 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Apr6g0118 BAH 8.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0118 - - gmx:112998769 2586.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0118 6 1139204 1147512 Apr6g0118 6 1139204 1147512 ECH