Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0112 ATGGGAAGAGGATGGTCGTTTTACAGGGATTTGCTTCCAATTGTGGTGATTATAGGCAATGAATGCAATGACATGGGCTTACTCACACTGTTCAAAGCAGCCACACTGCAAGGGATGAATAATCATGTCTTTGTTGCCTATGCTTATGCTGTTGCTACCACTATACTCATTCCTGTGACTTATTTCAGCAGAAGATCAAGAGTGGTTCCTCCACTTAGTTTCTCCATAATATCCAAAATTGTTCTTCTTGGGGTGATAGGAAGTTCTTCTCAGGTGCTCGGGTATGCTGCCGTTAGTTACAGTTCTCCAACACTTGCTTCATCTATTGGCAATCTGGTGCCTGCTTTCACCTTCATCCTTGCTGTAATTTGCAGGATGGAAAAGTTGTCTGCCAAAAGTAGAAGTAGTCAAGCTAAGGTAATGGGAAGCATAATATCAATAGCAGGTGCATTTGTATTGACTTTCTACAAAGGCCCATCTATCATCAATGCTCACACACATCTTTCCTTACTACAACAACCAATTAGCTTTCTTAAATCAGAGGATGCAAGTTGGGCCATTGCTGGTATTCTGCTAATAGCTGACTACTTTCTGGCTTCAGTATGGTACATTTTACAGATGGATATCTTGAAAGTGTTCCCAGATGAACTAACTTTAGTCTTCTTTTACAATGTGACCGCCACCATATTATCTATAGCTGTAGGTTTACTTACAGTGCCAAATGCTAGTGATTGGAAAATAGGAGTAGATATTTCACTGATCTCCATTGTTTGCTCTGGAATATTTGGAAAGTTAATGAGCAATGTAGTTTATGCCTGGGCCCTGCATTTAAAGGGGCCTGTCTATGTAACATCATTCAAGCCACTCCAAATTGTTATAGCTGTTGCAATGGGTGTAATGTTCCTTGATGACACTCTTTACATTGGAAGTATAGTTGGAGCCATAATAATATCACTTGGTCTTTATGCTGTACTGTGGGGCAAATCAGCAGAAGGGATAGATGAAGATGTTGGTAGCCTTGAATCACCAACTACTGAAAATGTTCCTCTCTTGCAAAGCTACAACAGAACTGAAACTAACTGA 1083 0.4026 MGRGWSFYRDLLPIVVIIGNECNDMGLLTLFKAATLQGMNNHVFVAYAYAVATTILIPVTYFSRRSRVVPPLSFSIISKIVLLGVIGSSSQVLGYAAVSYSSPTLASSIGNLVPAFTFILAVICRMEKLSAKSRSSQAKVMGSIISIAGAFVLTFYKGPSIINAHTHLSLLQQPISFLKSEDASWAIAGILLIADYFLASVWYILQMDILKVFPDELTLVFFYNVTATILSIAVGLLTVPNASDWKIGVDISLISIVCSGIFGKLMSNVVYAWALHLKGPVYVTSFKPLQIVIAVAMGVMFLDDTLYIGSIVGAIIISLGLYAVLWGKSAEGIDEDVGSLESPTTENVPLLQSYNRTETN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0112 360 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020|GO:0016021
Apr6g0112 360 PANTHER WAT1-RELATED PROTEIN 5 352 - -
Apr6g0112 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Apr6g0112 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 329 - -
Apr6g0112 360 PANTHER WAT1-RELATED PROTEIN 5 352 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0112 Apr-Chr6 1095382 1098882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0112 1 358 Nodulin-like Gene Family AT3G28050 46.237 2.25e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0112 - - gmx:100790743 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0112 6 1095382 1098882 Apr6g0112 6 1095382 1098882 ECH
Apr4g1738 4 22227861 22237680 Apr6g0112 6 1095382 1098882 ECH
Apr7g1615 7 23287899 23290915 Apr6g0112 6 1095382 1098882 ECH