Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0106 ATGGCTTCTTGGAATTGGAATTGGAATAGAACTGTGTTTCCAACATCTATTTTGCTTGTTTGCATGTTTATTTTGATCAACACTATGAAGTTTGCAATTTCCTTGGCTTTGGATACGGAATGCAGCCTTAAAATTCAATTGTTGAATGATTCAAGTTGTCAAGAGGGAAACTGGCATGAGCTCATGCACAGTAAGTGCTGTGGAGAAGCATTTGATTCTTACCTCTATGCTCTTGCTCAGCATGCAAATCTAACTGGGAGGGTTTACTTGGATTCTACTGAGCAAAGAAATTGTCTGTCTAGAGTAAAGGGTTTTAAAGATGATATTTTTGGTTGTGGAATTGAGAACCTAACAAGTGGTGGTGGGGGATGTTCTGACTTGTTGGTTGCTGATGTTTGGAATAAATTAGGAAATGAGCTTAAAAGTTTAGATGAGAAATGTCAATTTCAGACTTCAGGGAATGGCTATGAACAATCATGTTCTTTGTGCTTGAGGCCTTGGAAAACAACAGGAGAGACAAGTTCCAGAAAGACCAATGTTAAAGCTGAAAAAATTGAAGATGACCTTTGTAGAATTGCTGTAATTGTGACATTGATAAGCAGCAAAATTGAAAATGAGATGTATGTCCACACAGTTCTGAGATGCCTTGGAACAAAACATATTTATATAGAAAATGAAACCACACAAGGCAATCAGAACATGGAGAGTAATAGAGGTACATGGATTCTTATTGGAGCAACCATAGGGGTTATATTGATGATAGTTATTGCATACTCCATGTTACGTAGATGCTTTAGATCAGCCCCACCAAGAAAAGAAGTAACATTTGGAGATATGTTAAAGAAAACTTCTTGTCCTAGAGTTCATATCAAAGAAGTGTATGCTGCCACTAACCATCTGAATGAAATGAATATCATTGGGGAAGGATCTGCAGGCAAGGTCTATAAAGGCACAATGAGAAATAATCAGCATGTTGCAATAAAGCACGTAATCAATGATGATGGAAATATGGAGACTTTTGCTAGAGAAGTTACAAGCTTGTCTCATGTCAGACACCCAAATCTTGTTGCTTTGCTGGGTTACTGTGTAGAAGGAGATGAATGCTTTCTGGTCTATGAGCTATGTCCAAATGGAAGTCTTTCAGAATGGCTATTTGGCAAGAACAAGGTGCTATCATGGATTCAGAGGCTAGAAATTGCAATTGATAGTGCTAGAGGTCTTTGGTTCTTACATACATATGCAGGAGGTTGCATCGTTCACCGTGATATCAAGCCAACAAATATTCTTCTTGGATCCAAATTTGAGGCAAAGCTATCAGACTTTGGACTTTCTAAAGTCATTGAGGTGGGTGAAACATATGTTAGCTCTGAAGTAAGGGGAACTTTTGGATATGTTGATCCTGAGTACCAAAGCAACCACCATGTGAATTCATCTGGGGATGTTTACAGCTTCGGTATGGTACTTTTACAAATCCTCTCTGGAAAGAAGGTTATAAATTTGAAACTGAAGAAACCAATGTCACTGAATAAAATGGCAAAAGCAATCACCAAGGGTGGCAGCATAACAGGATTTGTTGATCCTAAACTTCAAGGAGACTACTCTGGAGAAGCATTTGATTTTACACTTAAGCTCGCTCTATCTTGTACATCCCTTAACCAACAACGTCCATCCATGGAGCAGGTTGTCCAAAAACTAGAAGAGGCTCTATTGATTTCAAAAGAGAGGAAGGCTTCGACTACAAAAACTCCAGCAGACGATATTTCTAATCCATAA 1773 0.3841 MASWNWNWNRTVFPTSILLVCMFILINTMKFAISLALDTECSLKIQLLNDSSCQEGNWHELMHSKCCGEAFDSYLYALAQHANLTGRVYLDSTEQRNCLSRVKGFKDDIFGCGIENLTSGGGGCSDLLVADVWNKLGNELKSLDEKCQFQTSGNGYEQSCSLCLRPWKTTGETSSRKTNVKAEKIEDDLCRIAVIVTLISSKIENEMYVHTVLRCLGTKHIYIENETTQGNQNMESNRGTWILIGATIGVILMIVIAYSMLRRCFRSAPPRKEVTFGDMLKKTSCPRVHIKEVYAATNHLNEMNIIGEGSAGKVYKGTMRNNQHVAIKHVINDDGNMETFAREVTSLSHVRHPNLVALLGYCVEGDECFLVYELCPNGSLSEWLFGKNKVLSWIQRLEIAIDSARGLWFLHTYAGGCIVHRDIKPTNILLGSKFEAKLSDFGLSKVIEVGETYVSSEVRGTFGYVDPEYQSNHHVNSSGDVYSFGMVLLQILSGKKVINLKLKKPMSLNKMAKAITKGGSITGFVDPKLQGDYSGEAFDFTLKLALSCTSLNQQRPSMEQVVQKLEEALLISKERKASTTKTPADDISNP* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0106 590 Gene3D Transferase(Phosphotransferase) domain 1 375 586 - -
Apr6g0106 590 Gene3D Phosphorylase Kinase; domain 1 267 374 - -
Apr6g0106 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Apr6g0106 590 Pfam Protein kinase domain 302 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0106 590 SMART serkin_6 300 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0106 590 Pfam SPARK 39 180 IPR043891 -
Apr6g0106 590 ProSiteProfiles Protein kinase domain profile. 300 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0106 590 SUPERFAMILY Protein kinase-like (PK-like) 282 565 IPR011009 -
Apr6g0106 590 PANTHER - 44 583 - -
Apr6g0106 590 PANTHER OS01G0750732 PROTEIN 44 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0106 Apr-Chr6 1040610 1043828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0106 287 575 Receptor kinase-like Gene Family AT2G28970 43.197 4.06e-61 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Apr6g0106 Pkinase 4.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0106 - - aprc:113867593 1200.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0106 6 1040610 1043828 Apr6g0106 6 1040610 1043828 ECH