Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr6g0103 | ATGATTGAGAGGGGTACAAATGGTGGCAAAAGCATGTCCATAACTGACTTGGAGAAGCTTCCATGCTATGATTATGTTGCCAAAGACAATACAAGCAGCCCTGTGGATTGTGCAGTTTGCTTGGAGAACCTCATTACAGGTGATAAGTGCAGACTGTTACCTATGTGCAAGCACAGTTTTCATGCTCGAAGTGTGGACACATGGCTTCTAAAGACGCCCATTTGTCCAATTTGCCGGTCTAATGCTGCTTCTCATAGTGAAGACCAAGTTATAGGTATCAGTGAGTACTTTATTGAACCAATCAGCGGGTCTAGGGAGAGCCTAGAAAGAGGTCCATCCAGGAATGTTGACATAGAATTGATACAAAATCCAACCTTAAGGCTGAGCTAA | 390 | 0.4359 | MIERGTNGGKSMSITDLEKLPCYDYVAKDNTSSPVDCAVCLENLITGDKCRLLPMCKHSFHARSVDTWLLKTPICPICRSNAASHSEDQVIGISEYFIEPISGSRESLERGPSRNVDIELIQNPTLRLS* | 130 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr6g0103 | 129 | SMART | ring_2 | 37 | 78 | IPR001841 | - | |
Apr6g0103 | 129 | Pfam | Ring finger domain | 36 | 79 | IPR001841 | - | |
Apr6g0103 | 129 | SUPERFAMILY | RING/U-box | 26 | 85 | - | - | |
Apr6g0103 | 129 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 12 | 89 | IPR013083 | - | |
Apr6g0103 | 129 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 9 | 91 | - | - | |
Apr6g0103 | 129 | ProSiteProfiles | Zinc finger RING-type profile. | 37 | 79 | IPR001841 | - | |
Apr6g0103 | 129 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 9 | 91 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr6g0103 | Apr-Chr6 | 1030402 | 1030791 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr6g0103 | 17 | 84 | C3H Transcription Factor Family | AT2G18650 | 47.826 | 2.26e-15 | 69.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr6g0103 | - | K15692 | aprc:113867591 | 268.085 |