Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0097 ATGAAGAAGAGTGAGAGTGGGGGTGGTGGAGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAACTTCAGAGGCATCTAAGTAGAGCATGGACCATGGAGAAGAACAAGGAGAAGGAAGAAGATGAAGTTGAAGGAAGGTCCACAAGAAGCAGACAAGAATGGGAGATTGACCCTTCTAAGCTTATCATCAAGACTGTCATTGCTCGTGGCACTTTTGGTACTGTTCACCGTGGGATTTATGATGGCCAAGATGTTGCAGTTAAGCTCCTTGACTGGGGAGAAGAGGGCCATCGGTCAGAGGCTGAAATAGCTTCTTTGAGAGCTGCTTTTACACAAGAAGTTGCTGTCTGGCACAAGCTTGACCATCCTAATGTAACCAAGTTTATTGGTGCAACAATGGGAACATCAGAGCTACAGATACAAACAGAAAATGGTCATATTGGTATGCCAAGTAATGTTTGTTGTGTTGTTGTTGAATATTGTCCTGGAGGTGCGCTGAAGTCTTATCTCATTAAAAACCGGAGACGGAAGCTGGCTTTTAAAGTGGTTGTTCAACTGGCTCTTGACCTTGCAAGAGGGTTGAGCTATCTCCACACAAAGAAGATTGTCCACAGAGATGTTAAAACAGAAAATATGCTTCTGGACAAGACACGAACCTTGAAAATAGCTGATTTTGGAGTTGCTCGTATTGAGGCTTCCAATCCTCATGACATGACAGGTGAAACTGGAACCCTTGGTTACATGGCTCCTGAGGTTCTAAATGGTAATCCATACAATAGAAAGTGTGATGTGTACAGTTTTGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCCTATCCTGACCTTAGTTTCTCAGAAGTGACCTCAGCTGTTGTACGACAGAATCTTAGGCCAGAGATTCCACGATGTTGTCCAAGCTCTCTGGCAAATGTGATGAAAAGATGCTGGGATGCCAATCCTGACAAGAGGCCAGAGATGGATGAAGTGGTGTCCATGTTGGAAGCTATTGACACATCAAAGGGTGGAGGAATAGGGAAGGAAGACTCAAGATGGAATGCATACAAAAAAAGTGTGAAAGCCATAGTTAATGAAAAAGAGCTCTACAATTACTTGTTACTTTGTTGGGCTATAATTTTTGTAAAGCTAATTGTGCCGTCTCCTCATTGCACCCATTTATATAATGTTTCTATGTAA 1215 0.4305 MKKSESGGGGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKEKEEDEVEGRSTRSRQEWEIDPSKLIIKTVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELQIQTENGHIGMPSNVCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHTKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGIGKEDSRWNAYKKSVKAIVNEKELYNYLLLCWAIIFVKLIVPSPHCTHLYNVSM* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0097 404 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 355 - -
Apr6g0097 404 Gene3D Transferase(Phosphotransferase) domain 1 166 377 - -
Apr6g0097 404 ProSiteProfiles Protein kinase domain profile. 66 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0097 404 Gene3D Phosphorylase Kinase; domain 1 54 149 - -
Apr6g0097 404 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 355 - -
Apr6g0097 404 CDD STKc_MAP3K-like 72 340 - -
Apr6g0097 404 SMART serkin_6 66 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0097 404 PRINTS Tyrosine kinase catalytic domain signature 163 176 IPR001245 GO:0004672|GO:0006468
Apr6g0097 404 PRINTS Tyrosine kinase catalytic domain signature 201 219 IPR001245 GO:0004672|GO:0006468
Apr6g0097 404 PRINTS Tyrosine kinase catalytic domain signature 267 289 IPR001245 GO:0004672|GO:0006468
Apr6g0097 404 PRINTS Tyrosine kinase catalytic domain signature 311 333 IPR001245 GO:0004672|GO:0006468
Apr6g0097 404 MobiDBLite consensus disorder prediction 34 56 - -
Apr6g0097 404 SUPERFAMILY Protein kinase-like (PK-like) 50 340 IPR011009 -
Apr6g0097 404 Pfam Protein tyrosine and serine/threonine kinase 68 340 IPR001245 GO:0004672|GO:0006468
Apr6g0097 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0097 Apr-Chr6 945086 949796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0097 2 307 MAP Kinase Kinase Kinase AT3G01490 76.945 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Apr6g0097 PK_Tyr_Ser-Thr 9.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0097 - - gmx:100796762 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0097 6 945086 949796 Apr6g0097 6 945086 949796 ECH