Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0086 ATGGAAACAGATGCTTCAAGCACTGATGCTGTTATTAGTATTCCAACTCACACAAAAGCTTGGTACTACTCTGAACATGGAAGAGCAGCTGATATTCTAAAGTTAGATCCTAATTGGGAACTTCCCCAACTCAAAGACGATCAAGTGCTCATCAAAGTCATAGCAGCATCCCTTAATCCCGTTGATTACAAAAGGATGCATGGCTTGTTCAAGGACATTGATCTTCATCTACCTATTGTGCCGGGTTTTGATGTTGCTGGCATAGTGCTCAAAGTGGGAGAAGAAGTGCAAAAATTTAAGGTTGGGGATGAAGTATATGGTGATATCAACGAGGAAGGCTTATCCAACTTAAAGATTCTTGGCACTTTGTCAGAGTATAGTATTGCTGATGAGAGACTTTTGGCTCATAAACCATCAAATCTAAGCTTCGTTGAAGCTGCCAGCATTCCTTTAGCACTTGAAACTGCTTATGAAGGCCTTGAACGTGCTGAGTTTTCTGCTGGTAAATCAATCCTTGTTTTGGGAGGAGCTGGTGGAGTTGGAACCTTTGTCATTCAGCTTGCCAAACATGTTTATGGCGCGTCTAAGATAGCAGCAACAGCTAGCACTGGGAAACTCCAACTTTTAAGGAATCTGGGAGTTGATTTGCCTGTTGATTATACAAAGGAGAACTTTGAAGACCTTCCAGAGAAGTTTGATCTTGTGTATGATCTAGTAGGGGAATCTGATAGAGCATTGAAGGGGATTAAGGAAGGTGGGAAAGCAGTGACAATAGTGTCTCCTGGACTTCCACCACCAGCTATTTTCTTTGCACTCACTTCCAAAGGGTCTATCTTAGAGAGATTAAGACCTTACTTTGAGAGTGATCAATTGAAGCCAATACTTGATACCAAAACTCCAATGCCATTTTCTCAAGTTATTGAAGCCTATTCCTACTTGGAAACTTCAAGAGCCACAGGAAAAGTGGTTGTTTATCCCATCCCATGA 987 0.4154 METDASSTDAVISIPTHTKAWYYSEHGRAADILKLDPNWELPQLKDDQVLIKVIAASLNPVDYKRMHGLFKDIDLHLPIVPGFDVAGIVLKVGEEVQKFKVGDEVYGDINEEGLSNLKILGTLSEYSIADERLLAHKPSNLSFVEAASIPLALETAYEGLERAEFSAGKSILVLGGAGGVGTFVIQLAKHVYGASKIAATASTGKLQLLRNLGVDLPVDYTKENFEDLPEKFDLVYDLVGESDRALKGIKEGGKAVTIVSPGLPPPAIFFALTSKGSILERLRPYFESDQLKPILDTKTPMPFSQVIEAYSYLETSRATGKVVVYPIP* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0086 328 Gene3D - 25 324 - -
Apr6g0086 328 SMART PKS_ER_names_mod 28 324 IPR020843 GO:0016491
Apr6g0086 328 Pfam Alcohol dehydrogenase GroES-like domain 47 108 IPR013154 -
Apr6g0086 328 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 11 328 IPR044626 GO:0016628
Apr6g0086 328 Gene3D - 160 275 - -
Apr6g0086 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 141 276 IPR036291 -
Apr6g0086 328 CDD MDR_like_2 19 324 - -
Apr6g0086 328 Pfam Zinc-binding dehydrogenase 212 324 - -
Apr6g0086 328 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 11 328 - -
Apr6g0086 328 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 168 189 IPR002364 GO:0008270|GO:0016491
Apr6g0086 328 SUPERFAMILY GroES-like 17 173 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0086 Apr-Chr6 822498 825322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0086 64 105 Monolignol Biosynthesis Gene Families AT1G72680 52.381 6.25e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0086 K18980 - gmx:100788619 525.398