Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0078 ATGCCTGAAGGGAGCAAAAAGAGGATACGTTTTAGCAAGTTATATAGTTTTTCTTGTTTGAAATCTCCATTCAGAGATGGTCATTCACAAATTGGGCAAAAGGGGTATTCAAGGGTTGTTTTCTGCAATGATCCTGATAATCCAGAAGCAATTCAGTTGAATTATGGAGGCAACTATGTTTCAACGACCAAGTACACAGCTTTTAATTTTATCCCCAAGTCTTTGTTTGAGCAGTTCAGGAGGGTTGCAAATATCTACTTTCTTATTGTTGCGTGTGTTTCATTCAGTCCATTGGCACCTTTTGCTGCTCTAAGTATTGTTGCTCCCTTATTGGTTGTGATTGGAGCTACTATGGCCAAGGAAGCTGTGGAAGATTGGAGGAGGAGAAAGCAGGATATAGAAGCAAACAACCGAAAGGTTGATGTATATGGTAGAAATTATACATTTGTGGAGACTAGATGGAAGAAACTCCGTGTTGGTGATATCATTAAAGTGTGTAAGGATGAATACTTTCCTGCCGATCTTCTCTTGCTTTCATCAAGCTATGATGATGGGGTTTGTTATGTTGAGACTATGAATCTTGATGGAGAAACTAATCTAAAATTAAAGCATGCCTTGGAGGTGACAACTCATCTTCATAATGAAAAATCTCTCCAAAAGTTTAGGGCTATGGTTAAATGTGAGGATCCTAATGAAAATCTGTACTCATTTATTGGAACTTTACAATATGATGGTAAAGAATATCCTCTTTCCTTGCAGCAGATCCTGTTAAGAGATTCTAAGCTGAAAAACACTGATTATATCTATGGCATTGTTATCTTTACTGGCCATGATACAAAAGTCATGCAGAATTCCACTGATCCTCCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAGATTATCTACATCCTCTTCAGCACATTGATTTTGATATCCTTTGTTGGTTCAGTCTTTTTCGGTGTTGAGACCAAAGAGGATATTAGTGCAGGCAGGTATAGAAGATGGTATCTAAGACCGGACGATACGACTGTGTTTTATAGTCCTAGAAGGGCAACACTTGCTTCTATTCTTCATTTTTTGACTGCCCTTATGCTGTATGGATATCTGATTCCAATATCACTTTATGTGTCCATAGAAATTGTGAAAGTTCTGCAGAGTATTTTCATCAATCAAGATCAGGAAATGTATTATGAAGAAACAGATAGGCCAGCTCGTGCACGCACGTCTAATTTGAATGAGGAACTTGGTCAGGTTGATACAATTTTGTGTGACAAAACTGGTACCTTGACATGTAACTCTATGGAGTTTGTCAAATGTTCCATAGGGGGTGTTCAATATGGTCGTGGTATGACAGAAGTGGAGAAGGCACTTGCTAGGAGAGGAAAAGATGGAGAATCTGAAGTTGAGGGTGCATCATCTGATTTCCTGAGCCTAGACAATGATGCAACAGACTCTCGGCATCCAGTTAAAGGCTTTAACTTTAGAGATGAACGGATAATTAATGGACAATGGGTTAATGAACCTCATCCAGACATCATACAGAGATTCTTTCGAGTTTTAGCTATTTGTCACACAGCTATTCCAGATGTAAATAAACAGTCAGGAGAGATTTCCTACGAAGCTGAGTCACCGGATGAAGCAGCTTTTGTCATAGCTGCAAGGGAACTTGGCTTTGAGTTTTTTGCACGGACACAAACAAGCATTTCATTGCATGAATTGAATTATGAAAGTGGAAAAAAGGTTGACAGAGTGTACCAGTTGCTGCATGTCTTAGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGTGATAGTGAGGAATGAAGAAAATCAATTATTGCTCCTATGCAAGGGTGCAGACAGCATAATGTTTGAAAGGCTCTCGCAACATGGAAGACAGTTTGAGGCTGAAACCAAGGATCATATCAAAAGATATGCTGAGGCAGGTTTAAGAACCCTCGTAGTCACATACCGTGAACTTGATGAAGAAGAATATAAGTTGTGGGACATAGAGTTTTCAAAGATCAAAACTTCTGTAACAGCAGATAGAGATGCACTAGTGGATGCAGCTGCTGATAAGATGGAAAGAGATTTGATACTTCTCGGTGCTACAGCGGTAGAGGATAGACTGCAAAAAGGGGTTCCTGAATGTATTGAAAAACTTGCACAGGCAAAAATCAAGTTATGGGTACTGACTGGAGACAAGATGGAAACTGCAGTCAACATAGGGTTTGCTTGTAGTTTACTTAGACAGGACATGAAACAGATAGTGATCACTCTTGATTCACCAGACATCCTATCCTTGGAAAAACAAGGGGAAAAAGAGGCTCTACGAAAGGCCTCTCTTGAAAGCATTAAGAAGCAAATTAAGGAGGGAATCTCGCAAGTCAAGTCTGCGAAAGAGAGTTCTAATACAAATAAAGAAATTTCTTCAGCATTTGGATTGATAATTGATGGGAAGTCCTTAGATTATTCTCTTGACAAGATTTTGGAGAAGTCCTTCTTTGAGCTGGCAATTAACTGTGCTTCTGTCATATGTTGCCGATCTTCACCCAAGCAGAAAGCTCGTGTTACAAGATTGGTGAAATTGGGAACAGGGAAGACAACATTATCTATTGGAGATGGGGCAAATGATGTTGGCATGCTTCAGGAGGCTGATATTGGAGTTGGCATTAGTGGTGCTGAAGGGATGCAGGCTGTAATGGCAAGTGATTTTGCCATAGCTCAATTCCGTTTTCTGGAGCGTTTGTTGTTGGTACATGGCCACTGGTGTTATAGGCGAATATCAATGATGATATGTTATTTTTTCTATAAAAACATTGCATTTGGATTTACCCTATTTTGGTTTGAGGCATATGCTTCTTTTTCTGGTCAAGCTGCTTACAATGATTGGTATATGTCATTTTACAATGTCTTCTTCACTTCACTTCCAGTAATCGCTCTAGGTGTTTTTGATCAGGATGTTTCTGCCAAACTTTGCCTGAAGTATCCCTTTCTATATCTAGAGGGAGTAGAGGACACCCTCTTCAGTTGGCCTCGGATTATCGGCTGGATGTTAAATGGAGTACTTAGTTCTTTGGTAATCTTTTTCTTGACCACTAATTCTGTCTTAAATCAGGCTTTCAGAAGAGACGGAAAGGTGGTTGATTTTGAAATACTTGGTGTCACAATGTATACATGTGTGGTGTGGACTGTGAATTGCCAAATGGCACTATCCATCAACTACTTCACTTGGATACAACATTTTTTCATATGGGGCAGCATTGCCTTTTGGTATATATTCTTGTTGGTTTATGGTTACCTCTCTCCAGCTATATCCACAACATCTTACAGGGTTTTTGTGGAAGCATGTGCTCCTAGTGGTCTATATTGGCTGGTTACCCTTTTGGTGGTGGTGTGTGTGCTTCTACCTTATTTCTCATATAGATCTTTCCAAAGTCGGTTTCTACCAATGTACCATGATATTATACAAAGAAAACAAGTAGAAGGGCCTGAAATTGGCCTATCTGATGAGTTACCTAAACAAGTTCAAGGCAAATTACTACATCTGAGAGAGAGATTGAAGCAAAGGGAGGTGTGA 3582 0.395 MPEGSKKRIRFSKLYSFSCLKSPFRDGHSQIGQKGYSRVVFCNDPDNPEAIQLNYGGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACVSFSPLAPFAALSIVAPLLVVIGATMAKEAVEDWRRRKQDIEANNRKVDVYGRNYTFVETRWKKLRVGDIIKVCKDEYFPADLLLLSSSYDDGVCYVETMNLDGETNLKLKHALEVTTHLHNEKSLQKFRAMVKCEDPNENLYSFIGTLQYDGKEYPLSLQQILLRDSKLKNTDYIYGIVIFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTLILISFVGSVFFGVETKEDISAGRYRRWYLRPDDTTVFYSPRRATLASILHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDQEMYYEETDRPARARTSNLNEELGQVDTILCDKTGTLTCNSMEFVKCSIGGVQYGRGMTEVEKALARRGKDGESEVEGASSDFLSLDNDATDSRHPVKGFNFRDERIINGQWVNEPHPDIIQRFFRVLAICHTAIPDVNKQSGEISYEAESPDEAAFVIAARELGFEFFARTQTSISLHELNYESGKKVDRVYQLLHVLEFSSSRKRMSVIVRNEENQLLLLCKGADSIMFERLSQHGRQFEAETKDHIKRYAEAGLRTLVVTYRELDEEEYKLWDIEFSKIKTSVTADRDALVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLAQAKIKLWVLTGDKMETAVNIGFACSLLRQDMKQIVITLDSPDILSLEKQGEKEALRKASLESIKKQIKEGISQVKSAKESSNTNKEISSAFGLIIDGKSLDYSLDKILEKSFFELAINCASVICCRSSPKQKARVTRLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAKLCLKYPFLYLEGVEDTLFSWPRIIGWMLNGVLSSLVIFFLTTNSVLNQAFRRDGKVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIAFWYIFLLVYGYLSPAISTTSYRVFVEACAPSGLYWLVTLLVVVCVLLPYFSYRSFQSRFLPMYHDIIQRKQVEGPEIGLSDELPKQVQGKLLHLRERLKQREV* 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0078 1193 Gene3D - 111 287 - -
Apr6g0078 1193 SFLD p-type atpase 408 924 IPR044492 -
Apr6g0078 1193 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Apr6g0078 1193 PRINTS P-type cation-transporting ATPase superfamily signature 873 892 - -
Apr6g0078 1193 Pfam Phospholipid-translocating P-type ATPase C-terminal 901 1151 IPR032630 -
Apr6g0078 1193 Pfam Phospholipid-translocating ATPase N-terminal 40 103 IPR032631 -
Apr6g0078 1193 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Apr6g0078 1193 CDD P-type_ATPase_APLT_Dnf-like 57 1033 - -
Apr6g0078 1193 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 4 1164 - -
Apr6g0078 1193 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 841 956 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr6g0078 1193 Gene3D - 702 913 IPR023214 -
Apr6g0078 1193 Pfam Cation transport ATPase (P-type) 533 630 - -
Apr6g0078 1193 SFLD C1.7: P-type atpase like 408 924 - -
Apr6g0078 1193 Coils Coil 116 136 - -
Apr6g0078 1193 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 1164 - -
Apr6g0078 1193 SUPERFAMILY Calcium ATPase, transmembrane domain M 49 1150 IPR023298 -
Apr6g0078 1193 SUPERFAMILY Calcium ATPase, transduction domain A 144 284 IPR008250 -
Apr6g0078 1193 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 668 IPR023299 GO:0000166
Apr6g0078 1193 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1159 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr6g0078 1193 SUPERFAMILY HAD-like 419 928 IPR036412 -
Apr6g0078 1193 Pfam E1-E2 ATPase 136 328 - -
Apr6g0078 1193 Gene3D - 546 701 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0078 Apr-Chr6 749258 756882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0078 9 1164 Primary Pumps ATPases AT1G68710 64.582 0.0 1611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0078 K01530 - gmx:100817020 2207.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0078 6 749258 756882 Apr6g0078 6 749258 756882 ECH