Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0066 ATGCATCGGCTATGTCTCTCTCTCTCTCTCTCTCTGAACCCCAAAATGCAGAGCCTTTCTTTGTCACTGTCTCCTTCAACACAACGTGTTTCATATCACAAACCTTCTTCTTCATCTTCTTCTTCTTTACCTCTTAGTCTCACCATTAATGCACTTCCATGGCCATTTTCTTCTTCTCTTCTCACTGCTCGAAAGTCTTCTCCTTTCCTCATTTCCTCTGCAAAATTTGCATCTTTAAAGGTCTTTGCTGCCTCTTTTCCAGATGCTAAGAGTGATGAACCAGCCAAACAAACTAGTTTTGTTAACACTCTTCAACTTGGAGCTATGTTTGCAACCTGGTACCTCTTGAATATTTACTTCAACATCTACAATAAGCAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTTGGCTTTGCAACGTTGATGATTAATTTGATATGGGCTTTGAATTTACATCCAAGACCAAACATTACTGGTTCACAGATTGTATCAATCTTTCCACTGGCTGTGGCTCACACAATGGGGAACTTGTTGACCAACGTTAGTCTTGGCAAGGTTGCTGTATCATTCACTCACACCGTCAAGGCTATGGAACCTTTCTTCACTGTTGTTCTTTCTTCCCTTTTCCTGGCTGAGAGGCCCACTTTGTGGGTGGTTTCTTCACTTGTACCAATAGTAGGGGGAGTGGCACTTGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGGTTCAGCACGGCTATGGCATCTAACCTTACTAATCAATCGCGGAATGTTTTGAGCAAAAAATTGATGACTAATGAAGAGGAAGCTTTGGACAATATCAATCTCTACTCAGTTATAACAATCATTTCCTTTATCATGTTGGTTCCGTGTGCTATACTTTTGGAAGGTGTCAAGTTTACTCCTTCATACCTGCAATATGCTGCAAGCCAAGGGCTTAATATTAGGGAGTTATGTGTGAGATCGGTTTTGGCTGCTTTCTGCTTCCATGCATACCAGCAGGTATCTTATATGATATTACAGATGGTGTCACCTGTGACCCACTCAGTTGGAAATTGTGTGAAGCGTGTGGTTGTCATAATTTCTTCTGTTATCTTCTTCCAAACTCCAGTCTCACCCATTAACACAATTGGAACTGCATTTGCACTAGTTGGAGTTTTCTTGTACTCAAGGGCTAAACGGATTAAGCCAATGCCAAAAACACATTAA 1230 0.4089 MHRLCLSLSLSLNPKMQSLSLSLSPSTQRVSYHKPSSSSSSSLPLSLTINALPWPFSSSLLTARKSSPFLISSAKFASLKVFAASFPDAKSDEPAKQTSFVNTLQLGAMFATWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFATLMINLIWALNLHPRPNITGSQIVSIFPLAVAHTMGNLLTNVSLGKVAVSFTHTVKAMEPFFTVVLSSLFLAERPTLWVVSSLVPIVGGVALASMTEVSFNWIGFSTAMASNLTNQSRNVLSKKLMTNEEEALDNINLYSVITIISFIMLVPCAILLEGVKFTPSYLQYAASQGLNIRELCVRSVLAAFCFHAYQQVSYMILQMVSPVTHSVGNCVKRVVVIISSVIFFQTPVSPINTIGTAFALVGVFLYSRAKRIKPMPKTH* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0066 409 PANTHER SOLUTE CARRIER FAMILY 35 21 403 - -
Apr6g0066 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 322 401 - -
Apr6g0066 409 Pfam Triose-phosphate Transporter family 104 397 IPR004853 -
Apr6g0066 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 241 - -
Apr6g0066 409 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 104 407 IPR004696 GO:0016021|GO:0022857|GO:0055085
Apr6g0066 409 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 21 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0066 Apr-Chr6 615132 619614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0066 75 407 Antiporters AT3G01550 65.970 2.48e-148 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0066 K15283 - gmx:100819280 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0066 6 615132 619614 Apr6g0066 6 615132 619614 ECH