Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0063 ATGGAAAAAGAGGTTGTGGAAAATCTTTGGAATGGTGATAGAGACTCACAAATTCAAGCAGCTATGAAACTTAGTAGATTAAGAAGTAAACAGAGGCACAAGTTGGCAGAAAGTGGTGCAATGGTTCCTTTGATTTCCATGCTTCATTCTAAAAACTATGAAGCCATAGAAGCTTCTCTGTGTGCTCTACTCAGCCTTTGCTTTGGCAGTGAAAGAAACAAGATTCGGATCATCAAGTGTGGGGCTTTGCCAGTTTTGCTGAATTTCCTCCATTGTCGTAGCCAGCCAAATACAGTGACACAAATGACATTAGTAGCCATGCTAACCCTCTCGTCTTGCAATGCAAATAAGGTAGCAATTGCTTCATCTGGGGCTATCCAACTCTTGGCTGAATTCGTCAATAGTAGTTGTAGCACTCAGTCTCAGCTAGATGCCATAGCTACCCTGCACAACCTCACAACATGCCAAAACATTGTTCCATTGATTGTCTCTTCTGGTGTCATACTCTCCTTGCTTGAACTGATCCACAGATCAGTCAAATCATCTCAATTGGTTGAGAAAGCAATTGGGTTGCTAGAAAACATTGTCTCTTCATTAAAGAATGCACTTTGTGAGGCTTGTAGTGATGGAAGAACAATTAGGATGCTGGTTGAGACTATTGAAGATGGATCTTTACTAAGCAAAGAGCATGCAGTGAGTATGCTTCTACTTATATGCCAGAGCTGCAGAGATAAATATAGAGGTTTGATTTTGACAGAGGGAGTGATGCCAGGATTGCTTCAGTTAAGTGTGGATGGAACACGGAGAGCCAAATCCATGGCTAGAGAATTGTTGTTGCTTCTAAGGGACTGCAGAAACTATAGCTCGAGACGTAAACATATTAATCATGAGCTTATAGAAAGGGTAATGGAAGAAATTGATTCAAAAGGAGAGAAATTGGGCGATACTACTTTGAGGTTGATAGAGGAGATGCTTGCCAAGCTCAATGCATAA 993 0.4109 MEKEVVENLWNGDRDSQIQAAMKLSRLRSKQRHKLAESGAMVPLISMLHSKNYEAIEASLCALLSLCFGSERNKIRIIKCGALPVLLNFLHCRSQPNTVTQMTLVAMLTLSSCNANKVAIASSGAIQLLAEFVNSSCSTQSQLDAIATLHNLTTCQNIVPLIVSSGVILSLLELIHRSVKSSQLVEKAIGLLENIVSSLKNALCEACSDGRTIRMLVETIEDGSLLSKEHAVSMLLLICQSCRDKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRDCRNYSSRRKHINHELIERVMEEIDSKGEKLGDTTLRLIEEMLAKLNA* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0063 330 Gene3D - 199 304 IPR011989 -
Apr6g0063 330 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 125 IPR000225 GO:0005515
Apr6g0063 330 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 166 195 IPR000225 GO:0005515
Apr6g0063 330 SUPERFAMILY ARM repeat 4 312 IPR016024 -
Apr6g0063 330 Gene3D - 2 198 IPR011989 -
Apr6g0063 330 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 310 - -
Apr6g0063 330 PANTHER U BOX DOMAIN-CONTAINING 1 310 - -
Apr6g0063 330 SMART arm_5 113 154 IPR000225 GO:0005515
Apr6g0063 330 SMART arm_5 70 112 IPR000225 GO:0005515
Apr6g0063 330 SMART arm_5 155 197 IPR000225 GO:0005515
Apr6g0063 330 SMART arm_5 28 68 IPR000225 GO:0005515
Apr6g0063 330 Pfam Armadillo/beta-catenin-like repeat 29 67 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0063 Apr-Chr6 585230 586640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0063 3 291 U-box Gene Family AT2G23140 30.847 3.32e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0063 - - gmx:100778534 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0063 6 585230 586640 Apr6g0063 6 585230 586640 ECH