Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0061 ATGAATAAGATACCCTTAATGGAGTCAATTGTTGATGGAGTTGAGGCTTTATCAGAGGTTCAGAATTCATTTTCTGGGGTAAATCAAGATCCTCCTTCAACATCTGGGACTCCGCGTCCTTCGCGGCCTCCTTTGAGAGCATCTAGAAACCATGGAGCTTCTTCAACATCATTTTTGGGTGGTAACCAAACCAAGACCATCATCCACCATAAAAAAAACAGCTATGTAATTAATCAAAAGCATTCCTATCAAGAGGGTAACAATGTGGAGCATGAAGGATTGCCAACAAAGTTTTGCAGCAAGCAACCATTTGATGACTCCAAGAATTGTTGTGAGTCAAGTAAAGAGTTATTAGAATCCGACAAACCAGCCTTTGCTAATCAAGCAAAGAGTTACTGTCAGTCAGAGGTTACATTTTGTCCAAGTCCTCAGAATAGTTTCTATTCAGCCACTGTCTATTCAGAAGCCAAACAAAGTTTCACCAATACTGAAGTCAGTGAGCGTGCAAGTGTATGTGAGAGTGGCGAGGTGGCAAATTCCTGTGATTTTAATGAGAGCAGGAAGACCAGCATATGTAGAGTGAGTACTGGAAGTGATGTTAGTGATGAGAGTAGCACCAGTAGTTTGAGCAGTGCTTTGTATAAACCTCACAAGGCAAATGACATACGATGGGAAGCAATTCAAGCCATTCGAGCTCACGATGGGGTGTTGGAAATGAGGCATTTCAGGTTGTTGAAGAAATTGGGATGTGGAGACATTGGAAGTGTGTATCTAGCAGAACTGAGTGGCACAAGGACTTCTTTTGCCATGAAAATCATGAACAAGACAGAGCTGGCGAGCCGCAAGAAGCTTCTGAGGGCTCAGACAGAGAGAGAGATATTGCAGTCTTTAGATCATCCTTTTCTACCCACATTGTATACACATTTTGAGACAGAGACATTCTCCTGCTTGGTAATGGAGTTCTGCCCTGGTGGGGACCTGCATGCACTCAGGCAAAGACAAACTGGGAAGTACTTTTCGGAGCATGCTGTCAGGTTTTACGTGGCAGAAGTTCTCCTTGCCTTGGAGTACTTGCACATGCTTGGGATCATCTACAGAGACCTCAAACCTGAGAATGTGTTGGTGAGAGAAGATGGTCATATAATGCTATCAGATTTTGATCTCTCTCTAAGGTGCACTGTCAGTCCAACTCTAGTGAAGTCATCAAACTATAGCTCAGAGACAAAAAGCTCAGGATACTGCATTCAGCCTGCTTGCATTGAGCCAACATGCGCAATGCAGCCGGACTGCATCCAACCTGCATGCTTCACGCCACGTTTTCTATCTGGAAAATCGAAGAAAGAAAGGAAGTTTAAGCCAAAGAATGACATGCATCATCAGGTGACCCCTCTCCCCGAGCTAATTGCTGAGCCAACAAATGCCAGATCAATGTCCTTCGTGGGGACACACGAATACTTGGCTCCTGAGATCATCAAGGGAGAAGGGCATGGCAGTGCTGTGGACTGGTGGACATTTGGGATATTCTTGTATGAGCTTTTGTTTGGCAGAACCCCGTTCAAAGGTTCAGCAAATCGAGCAACGCTGTTTAATGTTGTTGGACAGCCTTTAAGGTTTCCTGAGTCTCCTACTGTCAGCTTTGCTACTAGGGACTTGATCAGAGGTTTGCTTGTAAAAGAGCCTCAGCATCGTCTTGCCTACAGACGTGGTGCTACCGAAATTAAGCAGCATCCATTCTTTCAGAATGTTAACTGGGCATTGATCCGTTGTGCAAATCCTCCAGAGGTTCCAAGACAGGTAATGAAATTGCCACAAACAGAAAAGGACCTTGGTGTGAAGTCTTCTGGTAATTATTTAGATATTGATTTCTTTTGA 1872 0.4407 MNKIPLMESIVDGVEALSEVQNSFSGVNQDPPSTSGTPRPSRPPLRASRNHGASSTSFLGGNQTKTIIHHKKNSYVINQKHSYQEGNNVEHEGLPTKFCSKQPFDDSKNCCESSKELLESDKPAFANQAKSYCQSEVTFCPSPQNSFYSATVYSEAKQSFTNTEVSERASVCESGEVANSCDFNESRKTSICRVSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAIRAHDGVLEMRHFRLLKKLGCGDIGSVYLAELSGTRTSFAMKIMNKTELASRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQTGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNYSSETKSSGYCIQPACIEPTCAMQPDCIQPACFTPRFLSGKSKKERKFKPKNDMHHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFATRDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRQVMKLPQTEKDLGVKSSGNYLDIDFF* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0061 623 SUPERFAMILY Protein kinase-like (PK-like) 219 601 IPR011009 -
Apr6g0061 623 Gene3D Transferase(Phosphotransferase) domain 1 473 597 - -
Apr6g0061 623 Pfam Protein kinase domain 476 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0061 623 Pfam Protein kinase domain 243 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0061 623 MobiDBLite consensus disorder prediction 48 63 - -
Apr6g0061 623 Gene3D Phosphorylase Kinase; domain 1 240 325 - -
Apr6g0061 623 ProSiteProfiles Protein kinase domain profile. 242 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0061 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Apr6g0061 623 CDD STKc_phototropin_like 240 597 - -
Apr6g0061 623 PANTHER FLIPPASE KINASE 1-RELATED 99 623 - -
Apr6g0061 623 MobiDBLite consensus disorder prediction 24 63 - -
Apr6g0061 623 SMART serkin_6 242 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0061 623 Gene3D Transferase(Phosphotransferase) domain 1 326 405 - -
Apr6g0061 623 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 99 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0061 Apr-Chr6 574575 578036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0061 174 623 AGC Kinase Gene Family AT5G47750 73.876 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr6g0061 Pkinase 1.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0061 K08286 - gmx:100810909 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0061 6 574575 578036 Apr6g0061 6 574575 578036 ECH