Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0043 ATGGCTATGTTTGGCTATGCAGTCATAATTGTAACATTCCTTAGCTTCCTAAACTTCTTCAAACGTAGATTCTATTGCAAATGTCCCCTCTTAACCGATTATCCTATCCTTGGCATGTTACCACCAGTCATCTTCAACTTGGGGCGGATCCATGATTTTTTCACTGATATTTTGAAACAAAATGGGGGCACTGGGGTGTTCACAGGACCATGGTTCACCAAAATGAACTATTTGGTCACGTGTGACTCTAACAACGTGCAACACATGTTGTGCAAGAGTTTTGACAACTATGTCAAGGGACCCGTGTTTCGTGAGATTTTTGAACCTTTCGGAGATGGGGTTGTCACTGCTGACTCAGAGACATGGAAATACATTAGAACTATGCTCCATTCTTTGATCAAACAAAGAAGGTTTGAAGCGTTTATTGATAAAACCATTCAAAAGAAGGTGCAAAAAAGCTTACTTCCAATATTGGATCGTGTACAACAACAAGGGACTGTGGTGGATCTTCAAGATGTTTTCAACAGGTTCACATTTGATAACATATGCTCTACTGTTGTAGGACATGATCCTAATTGTCTTTCCATTGATTTCCCTGAAGTTGCAATTGAGAAGGCTTTCAACGAATCTGAAGAGTCAATATTCTATAGACACACTGTGCCAAGCAGTGTTTGGAAGTTCCAAAAGTGGCTACAAATTGGTCAAGAGAAGAAGATGACAGAAGCAATCAAAACGTTTGATCAATTCATATACTCATGCATAGCATCCAAGAGAGAAGAGTTAAGCAAATGTAACAAAAGTGAGATGGCTGAAGCTCCCTTTGACTTGCTAACAGCTTTGATAAGTGAAGAGAGAGGACAAATGCATGATGCCAAGTTTCTAAGGGATGTTGCATTTAACTTTTTTGTAGGGGGAAGAGAAACCATAACTTCAGCTCTTACATGGTTTTTTTGGCTTGTTACTACACACCCTTTAGTGGAAGCCAAAATTCTTGAGGAGATCAAAGAAAAATGTGGGGCTAATGAGGGTCTTTTAGGCATGGAGGAGGTGAAAAAGCTTGTTTATCTCCATGGTTCTCTATGTGAATCTCTAAGACTTTTCCCTCCTATACCTATTGAGCGCAAGCAAGCAATTAAAGGTGACATACTTCCTAGCGGTCATCGTATTAATGCTAATACAATGATATTATTTTCTTTGTATGCAATGGGAAGGTTTGAACAAATATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATATCTGAGAGAGGAGAGCTTGTTTTTGAACCATCTTACAAATTCATTGCTTTTAATGCGGGACCAAGGACTTGTTTGGGAAAAGATTTATCATTTGTACAAATGAAGATTGTGGCAGCAACTATTCTGCGCAAATATCGTGTCCAAGTGGTGGAAGGTCATCTTGCTACCCCGAGCCATTCAATTGTTCTTCTTATGAAGAATGGTTTTAAGGTTAGCATCGCAAAAAGAGAAATTTGA 1503 0.3925 MAMFGYAVIIVTFLSFLNFFKRRFYCKCPLLTDYPILGMLPPVIFNLGRIHDFFTDILKQNGGTGVFTGPWFTKMNYLVTCDSNNVQHMLCKSFDNYVKGPVFREIFEPFGDGVVTADSETWKYIRTMLHSLIKQRRFEAFIDKTIQKKVQKSLLPILDRVQQQGTVVDLQDVFNRFTFDNICSTVVGHDPNCLSIDFPEVAIEKAFNESEESIFYRHTVPSSVWKFQKWLQIGQEKKMTEAIKTFDQFIYSCIASKREELSKCNKSEMAEAPFDLLTALISEERGQMHDAKFLRDVAFNFFVGGRETITSALTWFFWLVTTHPLVEAKILEEIKEKCGANEGLLGMEEVKKLVYLHGSLCESLRLFPPIPIERKQAIKGDILPSGHRINANTMILFSLYAMGRFEQIWGKDCLEFKPERWISERGELVFEPSYKFIAFNAGPRTCLGKDLSFVQMKIVAATILRKYRVQVVEGHLATPSHSIVLLMKNGFKVSIAKREI* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0043 500 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 498 - -
Apr6g0043 500 PANTHER CYTOCHROME P450 8 498 - -
Apr6g0043 500 SUPERFAMILY Cytochrome P450 33 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0043 500 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0043 500 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0043 500 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0043 500 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0043 500 Gene3D Cytochrome P450 18 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0043 500 Pfam Cytochrome P450 40 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0043 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Apr6g0043 500 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0043 500 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0043 500 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0043 500 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0043 Apr-Chr6 409001 410503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0043 1 498 Cytochrome P450 AT4G39490 42.829 1.98e-156 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0043 - - gmx:100780625 838.565