Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0042 ATGGCAACGCTAGTCTATGCAGCATCAATAATTGTGACACTTTTCTCGTTCCTTTACTTCCTCCATCGCAGACAATGTTGCAGACATCCTCTCCTAATAGACTATCCTATCCTTGGCATGCTACCCACAGTTCTTTGGAATTTGTGGCGCGTGCATGATTTTATCACTGAGATTTTGACACGACATGGTGGCACGGGTGAGTTCATTGGACCTTGGTTTACCGACATGAACTATGTCATCACTACTGACCCCATCAACGTGCACCACATGATGAGCAAGAGTTTCGACAACTACGTTAAGGGTACTGAGTTTCGTGAGATTTTTGATGCTTTTGGAGATGGGATATTCGCTGCTGATTCAGAGGGATGGAAATACAGTAGGTCTTTGTTCCATTCTTTGTTTAAACAAAGAACCTTCGAGGTGTTTATCGGGAAAACCATTCAGAGAAAGATACATCAAGGCCTTCTTCCAATATTGGATCATGCACAACAACAAGGGAAGGTGGTGGATTTACAAGATGTTTTCAATAGGTTCACTTTCGATAACATATGCTACATAGTTTTAGGATATGATCCTAATTGTCTTTCTATTGATTTCCCTGAAGTTGCAATCGAGACGGCTTTTAACCAAATAGAAGAGTCCATATTCTACCGACACGTGGTGCCAAAAAGTGTTTGGAAGTTAATGAAATGGTTTCAAATTGGTGCAGAGAAGAAGATGACAGAGGCATGTAAAACCTTTGATCAATTCTTGTATGCATGTGTGGCATCAAAGCGAGAAGAGCTATGCAAATCCTCCAATGAAAATAATGAAGCTGATCATGTTGACTTCCTTACATCTTTGATGAAAGAACAAAAGGGACAAGCACATGATGACAAGTTTTTAAGGGATGCTGTGTTCAATATTTTTGTAGCAGGAAGAGATACCATAACCTCAGCTCTCACATGGTTCTTTTGGCTTGTTGCTACAAACCCATTAGTGGAATCCAAGATTCTTGAAGAGATCAAGGATATCTTTGGTGGTAATGAAAAGAAGGTAGGGGATATAAGCGTGGAGAAGGTGAAAAAGCAAGTTTATCTCCATGGTGCTATATGTGAAGCATTGAGGCTTTTTCCTCCAATACCTTTTGAGCGCAAGCAAGCGATAAAAGCTGATACACTTCCTAGTGGACACAGTGTCAATCCCAATACAATGATATTGTTATCTTTGTATGCAATGGGGAGATTAGAAGATGTATGGGGAAAGGATTGTTTTGAGTTCAAGCCAGAAAGATGGATCTCAAAGAGAGGAGGCGTTGTTTATGCACCATCTTACAAATTCATTGCTTTTAACGCAGGACCCAGAACTTGTTTGGGCAAAGACGTGTCCTTTATTCAGTTGAAGATGGTGGCCACTGCTATTTTGCTTAACTATCGCATTCAAGTGGTGAAAGGTCATTTTGCTACTCCCATTCATTCAATTGTTCTTCTGATGAAGGATGGTTTGAAGGTTAGGGTAACAAAAAGAGATATTTAA 1515 0.4013 MATLVYAASIIVTLFSFLYFLHRRQCCRHPLLIDYPILGMLPTVLWNLWRVHDFITEILTRHGGTGEFIGPWFTDMNYVITTDPINVHHMMSKSFDNYVKGTEFREIFDAFGDGIFAADSEGWKYSRSLFHSLFKQRTFEVFIGKTIQRKIHQGLLPILDHAQQQGKVVDLQDVFNRFTFDNICYIVLGYDPNCLSIDFPEVAIETAFNQIEESIFYRHVVPKSVWKLMKWFQIGAEKKMTEACKTFDQFLYACVASKREELCKSSNENNEADHVDFLTSLMKEQKGQAHDDKFLRDAVFNIFVAGRDTITSALTWFFWLVATNPLVESKILEEIKDIFGGNEKKVGDISVEKVKKQVYLHGAICEALRLFPPIPFERKQAIKADTLPSGHSVNPNTMILLSLYAMGRLEDVWGKDCFEFKPERWISKRGGVVYAPSYKFIAFNAGPRTCLGKDVSFIQLKMVATAILLNYRIQVVKGHFATPIHSIVLLMKDGLKVRVTKRDI* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0042 504 Pfam Cytochrome P450 53 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0042 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Apr6g0042 504 PANTHER CYTOCHROME P450 7 502 - -
Apr6g0042 504 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0042 504 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0042 504 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0042 504 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0042 504 SUPERFAMILY Cytochrome P450 19 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0042 504 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 502 - -
Apr6g0042 504 Gene3D Cytochrome P450 21 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0042 504 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0042 504 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0042 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0042 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0042 Apr-Chr6 395642 397382 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0042 9 502 Cytochrome P450 AT2G23180 46.825 3.75e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0042 - - aprc:113867564 957.207