Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0040 ATGTTCATGTTTGGCTATTCAACAACACTTGTAGCACTCTTCAGCTTCCTATATCTTTGTCAGAGACGTCGCCGCAACAACTCCCCCTTAACAAATTGGCCTTTCCTCGGTATGTTACCACAAGTCCTATGTAATTTGTCACAAATACACGATTTCATAACCGAGGCATTGAAACCACAAGGTGGCACTGGAGAGTTCCTAGGACCTTGGTTCACCAACATGAACTATTTGGTCACTAGTGACCCCACCAATGTGCACCACATAATGAGCAAGAGTTTCGATAACTACATAAAAGGGCATGAGTTTCGTGAAATTTTTCAAGCTTTTGGAGATGGCATATTCACTGCTGATTCAGAGACATGGAAATACAACAGGTCTTTGTTCCATTCTTTGTTTAAACAGAGAAGCTTTGAGGTGTTTCTAGAGAAAACCATTCAAAAGAAGGTGCAAAACAACCTACTTCCAATACTGGATCATGTACACCAACAAGGGATTGTGGTGGATTTACAAGATGTCTTCAACCGCTTCACATTTGATAACATATGCTCCATAGTTTTAGGGTATGATCCTAATTGTCTTTCCATTGACTTTCCTGAAGTTGCATGTGAGAAAGCCTTTAACGAAGCTGAAGAGTGCATATTCTATAGACACGTAGTGCCAACCACTGTTTGGAAGTTACAAAAGTGGCTTCAAATTGGTCAAGAAAAGAAATTGACAAAAGCATGCAAAACGTTTGACCAATTCTTATATGCATGTATAGCATCTAAACGCCAAGTGCTAAGCAAATGCACCAAAAATGAAATGGCTGAGGCTCAAGTTGACTTGCTAACAGCTTTGATGAGAGAAGAAAAGGGACATGCACTTGATGACAAGTTCCTAAGAGATTCGGCATTTAATCTTTTTGTAGCTGGGAGAGATACCATAACTTCAGCTCTTACTTGGTTCTTTTGGCTTGTTGCTACACACCCATTAGTGGAATCCAAGATTCTTGAAGAGATCAAAGATAAGTTTGGTGACAAGGAAGAGAAATCAGGGGGTTTTGGTGTGGAAGATGTGAAAAAGCTAGTTTATCTTCATGGTGCTATATGTGAAGCGTTGAGGCTTTTTCCTCCTATTCCTTTTGAGCGCAAGCAATCAATAAAGGCTGATATACTTCCAAGTGGACACAGTATTAATCCCAATACAATGATCTTGTTTTCTTTGTATGCAATGGGGAGATTTGAAGATGTATGGGGAAAAGATTGTTCGGAGTTCAAGCCAGAAAGATGGATATCTGAAAGAGGAGGCATTGTTTATGCACCATCTTACAAATTCGTTAGTTTTAATGCTGGACCCAGGACCTGTTTGGGCAAAGAATTATCCTTCATTCAAATAAAAATGGTGATAACTGCTATTTTGTGCAACTATCGTATCCATGTGGTGGAAGCTAATCCTATCATCCCAAGCCATTCAATTGTACTTCTAATGAAGCATGGTCTCAAGGTTAGGATAACCAAAAAGGGAATTTGA 1509 0.395 MFMFGYSTTLVALFSFLYLCQRRRRNNSPLTNWPFLGMLPQVLCNLSQIHDFITEALKPQGGTGEFLGPWFTNMNYLVTSDPTNVHHIMSKSFDNYIKGHEFREIFQAFGDGIFTADSETWKYNRSLFHSLFKQRSFEVFLEKTIQKKVQNNLLPILDHVHQQGIVVDLQDVFNRFTFDNICSIVLGYDPNCLSIDFPEVACEKAFNEAEECIFYRHVVPTTVWKLQKWLQIGQEKKLTKACKTFDQFLYACIASKRQVLSKCTKNEMAEAQVDLLTALMREEKGHALDDKFLRDSAFNLFVAGRDTITSALTWFFWLVATHPLVESKILEEIKDKFGDKEEKSGGFGVEDVKKLVYLHGAICEALRLFPPIPFERKQSIKADILPSGHSINPNTMILFSLYAMGRFEDVWGKDCSEFKPERWISERGGIVYAPSYKFVSFNAGPRTCLGKELSFIQIKMVITAILCNYRIHVVEANPIIPSHSIVLLMKHGLKVRITKKGI* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0040 502 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0040 502 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0040 502 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0040 502 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0040 502 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 500 - -
Apr6g0040 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Apr6g0040 502 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0040 502 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0040 502 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0040 502 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0040 502 PANTHER CYTOCHROME P450 9 500 - -
Apr6g0040 502 SUPERFAMILY Cytochrome P450 32 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0040 502 Pfam Cytochrome P450 29 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0040 502 Gene3D Cytochrome P450 12 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0040 Apr-Chr6 370848 372356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0040 14 501 Cytochrome P450 AT2G23180 47.791 2.09e-172 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0040 - - aprc:113867564 755.747