Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0029 ATGTGTGGCCATCCTTTGTTACTTCTCAATTGCCAATATGATCAAACCTACATATACATCAATAACGTCAAATACCAAGTTTTGGTTGCCAACCCAGATAACCATACTTTGAGAATCGCTAGAGTGGACTACTTGCAAGGCCTGTGTCCACAACAATATCTCAACACCACCCTTCCCCCTGAGTTGTTTGTTTATGGGCAAAACTACAAGAATCTTTATTTTTTCTATGATTGTAATTCAAATGCCTACCCTAGTTACAATATTGCACGTTTTCCTTGTACCAAGAATGGTGTTGTGAGTGAATTTGTCTATCCTCAGTTTGAGGCTCAAAATCCTCCTATGCGATGTGCTACAAGTGTGGTTGTTCCAGTTTCAGTGTCATTGCTTGATGCTTGGAATTTGACCAAAATACAAGAGGCACTCAGTGATGGATTTGAAGTGAGATGGATGGCTGGTGTTGAAGAATGTAACAAGTGTGAGAACTCAAGTGGAGTATGTGGTTATTTGAATTCAAATCAACCAACCTGCTATTGCAAATCTTCAGATTCAGGCTCCACAACTTGTTCTCTCACCATTCCAACTGCAAAGGAACCTCAGGAACAGGCTCCTGCACTTCCAGGTAAAAAGTCCAAGGCAGTAGCTGTTGGAGTAGGCATTGCGGTGAGTGTTGCAGCCCTTGCTGGCATTCTTCTTGGATGCTGTCTATACATGAGACGAAGGAGAAGAATGTCTGAAAAGTCTCAAAGCAATGATCTGTTAATGCTTCCTTCAAGCAATGCCACTGTTAACTCAATTTACTCAACAATTAACATGTCTACAAGTACCCTTTCTTATTCCTCCTCCAAGTCTAACTCTGTGATGAAGAGTTACTACTTTGGTGTCCATGTGTTCAGTTATGCTGAACTAGAGGAAGGTACCAACAATTTTGACCCTTCAAGGGAACTTGGCGATGGAGGTTTTGGCACTGTTTACTATGGCACTCTCAAAGATGGACGTGTGGTTGCAGTGAAACGCCTTCACGAAAGGACTTTGAAGCATGTTGATCAGTTCATGAATGAAGTTGAGATTCTAGCTCGCTTGCAGCACAAGAACCTGGTAGCACTCTATGGATGCACTTCTAGGCACAGCCGAGAACTTCTCCTTGTTTATGAGTACATACCTAATGGAACAGTAGCAGATCATCTTTATGGAAAATGGGCAAAGTCAAAGTCACTTCCTTGGGCAGTAAGATTGAACATTGCAGTTGAAACAGCAGATGCACTAGCCTACCTCCATGCATCAGATGTCATACACCGTGATGTCAAGTCCAACAATATTCTCTTGGATGATGAATTTGGTGTCAAAGTTGCTGATTTTGGTCTCTCAAGGTTGTTCCCAAGTAATGTAACTCATGTGTCAACTGCTCCACAAGGAACACCAGGTTATGTGGACCCTGAGTATTACCAGAGCTACCAACTCACTGATAAAAGCGATGTTTATAGTTTTGGTGTGGTTTTAGCTGAGCTTTTATCATCTTTACCAGCTGTGGACATCACCAGGCATCGCCATGATGTAAATTTAGCTAATATGGCTTTAAGTAGAATTCAAAACCATGCTCTGCATGAGTTGGTTGATCCACGGCTTGGATTTGAAAAAGACTATGCTGCTATGCAGATGATAACAGCAGTGGCAGAATTGGCATTTAGGTGTCTGCAGGAGATAGACATGAGACCCTCCATGGGAGAGGTGCTGATGGTGTTGAGAGGAATCCAAAATGGAAGATATGATACACATAAAGCAGAAGAAGTGTTGGATAATAGGATAGAAGAAATTATGCTTTTGGAAAAAACTCCTTATCCCCTTTCACCAAATTCGGTTGCTGATAAATGGATTAGCAGGTCCACTTTGTCTAGTTCCTCCTAG 1902 0.4185 MCGHPLLLLNCQYDQTYIYINNVKYQVLVANPDNHTLRIARVDYLQGLCPQQYLNTTLPPELFVYGQNYKNLYFFYDCNSNAYPSYNIARFPCTKNGVVSEFVYPQFEAQNPPMRCATSVVVPVSVSLLDAWNLTKIQEALSDGFEVRWMAGVEECNKCENSSGVCGYLNSNQPTCYCKSSDSGSTTCSLTIPTAKEPQEQAPALPGKKSKAVAVGVGIAVSVAALAGILLGCCLYMRRRRRMSEKSQSNDLLMLPSSNATVNSIYSTINMSTSTLSYSSSKSNSVMKSYYFGVHVFSYAELEEGTNNFDPSRELGDGGFGTVYYGTLKDGRVVAVKRLHERTLKHVDQFMNEVEILARLQHKNLVALYGCTSRHSRELLLVYEYIPNGTVADHLYGKWAKSKSLPWAVRLNIAVETADALAYLHASDVIHRDVKSNNILLDDEFGVKVADFGLSRLFPSNVTHVSTAPQGTPGYVDPEYYQSYQLTDKSDVYSFGVVLAELLSSLPAVDITRHRHDVNLANMALSRIQNHALHELVDPRLGFEKDYAAMQMITAVAELAFRCLQEIDMRPSMGEVLMVLRGIQNGRYDTHKAEEVLDNRIEEIMLLEKTPYPLSPNSVADKWISRSTLSSSS* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0029 633 Pfam Wall-associated receptor kinase C-terminal 108 180 IPR032872 -
Apr6g0029 633 SMART serkin_6 309 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0029 633 SUPERFAMILY Protein kinase-like (PK-like) 289 583 IPR011009 -
Apr6g0029 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Apr6g0029 633 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Apr6g0029 633 Gene3D Phosphorylase Kinase; domain 1 279 385 - -
Apr6g0029 633 PANTHER - 1 624 - -
Apr6g0029 633 Gene3D Transferase(Phosphotransferase) domain 1 386 597 - -
Apr6g0029 633 Pfam Protein kinase domain 312 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0029 633 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 624 IPR044652 -
Apr6g0029 633 ProSiteProfiles Protein kinase domain profile. 309 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0029 Apr-Chr6 290571 294693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0029 274 633 Receptor kinase-like Gene Family AT1G25390 59.569 3.60e-148 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr6g0029 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0029 - - aprc:113867558 1216.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0029 6 290571 294693 Apr6g0029 6 290571 294693 ECH