Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0025 ATGAACACCTTTTCCTCAATTCAGCGTTTCCCTTGCTCAAGATTTTACTCTTTCACTGCCACAAGGACTCAAGTTCCTTTTCGTGCAAAGGTCTTCTTGTGCCAGGCAAAATCTGGCATAGATGGACCATTGAACTTAAAAGTGATATCCCCCACTCTGTTAGCAGCAGAAAAGGAAGAAGCCAAAGCTGTATTGACACTGTTTTTGAAGAAACAAGGTTTGAGCAATGCGGTTGCAGCTAGAACGATCAACAAGTCTGATCTTTTTATTGATCACCTTGTCTCAAAGCTTCACTCTAAGCACAAATCTTGGTACCTTGCAGGTAGGGAGCTTACAACTCTAGAGATAAGAGATGCTCTTATCGCATATCTCGAATCCCTTTTCAAAGAGCATGGAGACATTCTAATGAATGTTGTGGAAAGTTATCCAAATCCACCTGTTAAGGATAAATCAGCTGTGCCAATTCCTTCTCCTAGTCCAGTAGTAGACTCTAAGAAGCTTAAAGCTATGTCTCGAGTGAGTGAGTTGGACACACATGCTGGCAATCTTCGCCCTCATCTTGTGTATCTCATGGAACTTGGTATGGATATTGAGCAGATTAGGAGTATCATAAGAAGATTCCCATCTTTTGCCTACTATAGTTTGGAGGGTAAAATTAAGCCAGTGGTTGAGTTTTTTCTTGAACTTGGAGTGCCAAAAGAGAACATTCCAACTATCCTTACTAAAAGGCCTCAACTATGTGGCATTAGTCTATCTGAAAATCTTAAGCCCACCATGAAGTTCTTAGAATCTTTGGGTGTTGACAAGGAACAATGGCCAAAGGTGATCTATCGCTTCCCGGCCCTGCTAACTTATAGCAAGCAGAAGGTGTGGGAAAGTGTAGATTTTCTCTGTGAATTGGGCCTCTCAGAAGAGAGCATAGGTAAGATTTTAACTCGTTGCCCCAATATTGTTAGTTACAGTGTAGAAGACAATCTCCGACCCACGGCTATGTACTTTCGTTCTTTGGGAGTTGATGTTGGCATTCTTCTATTCAGGTGTCCACAGAATTTTGGTCTTAGCATTGAGGCCAATCTAAAGCCGGTAACAGAATTTTTCTTGGATAGGGGATACACTTTGGAAGAAATTGGTACCATGATTTCAAGATATGGAGCCTTGTATACCTTCAGCTTAACTGAAAATTTGGTTCCAAAATGGGATTTCTTTATGACCACAGATTACCCAAATTCTGAGCTTGTTAAATTCCCCCAATATTTCGGATACAATTTAGAGGAAAGGATTAAACCAAGATTTGCTCATATGAAAAAATCTGGAGTGAAGTTACTGCTGAACCAGGTCCTTTCACTGTCAAGCAGCAACTTTGATGAGGCATTGAAAAAGAAAATGAAGAAAATGAAATAA 1401 0.4033 MNTFSSIQRFPCSRFYSFTATRTQVPFRAKVFLCQAKSGIDGPLNLKVISPTLLAAEKEEAKAVLTLFLKKQGLSNAVAARTINKSDLFIDHLVSKLHSKHKSWYLAGRELTTLEIRDALIAYLESLFKEHGDILMNVVESYPNPPVKDKSAVPIPSPSPVVDSKKLKAMSRVSELDTHAGNLRPHLVYLMELGMDIEQIRSIIRRFPSFAYYSLEGKIKPVVEFFLELGVPKENIPTILTKRPQLCGISLSENLKPTMKFLESLGVDKEQWPKVIYRFPALLTYSKQKVWESVDFLCELGLSEESIGKILTRCPNIVSYSVEDNLRPTAMYFRSLGVDVGILLFRCPQNFGLSIEANLKPVTEFFLDRGYTLEEIGTMISRYGALYTFSLTENLVPKWDFFMTTDYPNSELVKFPQYFGYNLEERIKPRFAHMKKSGVKLLLNQVLSLSSSNFDEALKKKMKKMK* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0025 466 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 21 465 - -
Apr6g0025 466 SMART mt_12 377 408 IPR003690 GO:0003690|GO:0006355
Apr6g0025 466 SMART mt_12 201 232 IPR003690 GO:0003690|GO:0006355
Apr6g0025 466 SMART mt_12 409 440 IPR003690 GO:0003690|GO:0006355
Apr6g0025 466 SMART mt_12 237 268 IPR003690 GO:0003690|GO:0006355
Apr6g0025 466 SMART mt_12 164 196 IPR003690 GO:0003690|GO:0006355
Apr6g0025 466 SMART mt_12 308 339 IPR003690 GO:0003690|GO:0006355
Apr6g0025 466 SMART mt_12 273 303 IPR003690 GO:0003690|GO:0006355
Apr6g0025 466 SMART mt_12 341 372 IPR003690 GO:0003690|GO:0006355
Apr6g0025 466 Pfam mTERF 346 454 IPR003690 GO:0003690|GO:0006355
Apr6g0025 466 Pfam mTERF 183 367 IPR003690 GO:0003690|GO:0006355
Apr6g0025 466 PANTHER CGI-12 PROTEIN-RELATED 21 465 IPR003690 GO:0003690|GO:0006355
Apr6g0025 466 Gene3D Transcription termination factor 3, mitochondrial 249 464 IPR038538 -
Apr6g0025 466 Gene3D Transcription termination factor 3, mitochondrial 161 248 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0025 Apr-Chr6 256548 261239 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr6g0025 mTERF 9.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0025 K15032 K12177 gmx:100781900 772.311