Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0024 ATGACAGTATATACTGAGGTCTACTTGCAAGATATTGGCAAAGCTGTTCATCATCTGATCAATTCAATGTCTTCATCGGGTAGTGCATGGACAGCTCAAGATAACAAAGCGTTTGAAAGAGCACTTGCTATTTATGACAAGGACACCCCTGAACGTTGGTGGAATATTGCTAGGGCTGTTGGTGGAAAAACCCCAGAAGAAGTGAAGGGGCACTATGATCTCCTTGTAGAGGACATCAAGCGTATTGAGTCAGGCCAAGTGCCCTTTCCCACTTACAGGAATCCCAAAGATGGCGCATGA 300 0.45 MTVYTEVYLQDIGKAVHHLINSMSSSGSAWTAQDNKAFERALAIYDKDTPERWWNIARAVGGKTPEEVKGHYDLLVEDIKRIESGQVPFPTYRNPKDGA* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0024 99 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 22 94 - -
Apr6g0024 99 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 22 94 IPR044636 GO:0003700
Apr6g0024 99 CDD SANT 29 72 IPR001005 -
Apr6g0024 99 SUPERFAMILY Homeodomain-like 30 83 IPR009057 -
Apr6g0024 99 ProSiteProfiles SANT domain profile. 25 80 IPR017884 -
Apr6g0024 99 ProSiteProfiles Myb-like domain profile. 22 76 IPR001005 -
Apr6g0024 99 Gene3D - 20 89 - -
Apr6g0024 99 SMART sant 26 78 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0024 Apr-Chr6 247157 248384 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr6g0024 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0024 - - aprc:113867554 208.379