Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1868 ATGGTAAGCGGGGAACACAGTCTAAGCCCAAAAATGAAGCAACCAGTTTCTGATCAGAACGTGTCCAAGACTCACATCTCACCCTCACGTCACAGCTTTCGTTCGAAACCTTCTTCTAAAAATGGGAGAAGTAAGAGGAAAAACAGTGGTCGTCCCTGTACATCTGTGAACCTCCAAGCATACGACCTGAATGACCAGTCCTCAAACAGCCCTTACTACAAAGGTCTCACTGATCAATCCCTTGCTATCGTTGACACCATCGCTTCTTGTCCTCCACCTCATGCCCATCCACTCCTTCCATCTAGTCCTTATTACAAAGGTCTCACTGATTATTCCCTTGTTATTGGTCCTTGGAACCCTTCACATCACCACCATCCTATTCCTCCCAACAACTCCCTTTCCTACGAGTCTAGTCCTTACTATTTAGGTCTCATTGATTACTCCCTTGCACTTCATTCTCCACCCATTCAACCCCCTCTCCGTGACTCCCACTCTTCTTTCTTCTCCATGAACAGTGCCTTTTACTTCAAAAATAGGGATGAGATCATCGACAAACTCTCTTCACCACACTGTTCTTTATACCCGCCCCAGATCAAGACTGGCCTTTCTTTGAAGGAGTTGATGGTCGATGCTGATGTTGATGTTGGTGTTGATGTTGATGTTGTTGACTTTCTTATTGAAGAGAAGCCTCTATGGGAGAGAATATCAGAAGAAGGTAATGTTGGGAATGCATTTGAAGAGGAAACAAATTTGGGAGAGATGGAATTGATCCAAGAGAAGCCATTGAGGGAGAATATTTTTTTGGAGGAGACTGACACTGAATTGGTGACAAAGGGAGTCAACGATGATGTTGAGATGGTGATTGAAGAGAGAGTATTAGAGGCAAGTAATGCGGAGAGTGAATTAGAAGAAAATGCAGATGAAACGATTTTGGAGGAAATGGAGTTGATGAGCGATGATGTTGGGTTGTTGATTGAAGAGAAGGCATTGAGGGAGAGAGTATCAGAAAGAAGCAATGTGGTAGAAGAGATGGAACTCAAAGACCATCAAAAGGAGAAGAAGGCCTCAGAATCAGAAGGAGGAAATGTGAGTGAGGAGGGAAAGGTGTATTTGTATACATGGGCAGCCAAATACCAGCCCTTCAACTTGGTTGACTTCATCTGCAACAGAGATAAAGCACTTTACCTCAAAGCATTGGTGAAAGACGGGTGCGGCTGTAAACATTTTATATTTGAAGGACCGCCAAATGTCGGGAAAAGATCCATGATACGCGCTATGCTTCGAGAGGTATTTGGAGCTGATAGAGTGCAGGTCACACAAGAATGTAAAGACTTCAACTTAAAGGGAGAAATGGTAGATCATCTGCAAGTGCCCGTAAAGAAGTCACTTCATCATGTTGAGGTGAATCTGTCCGAGACAAAGGGATATGAAAAGCATGTAATTGTTCAGTTATTCAAGGAAACATATGGCATTACGATAAATAACTCGCTGCCTTGTAGTTCAGATAATTGTCAAGCAATCGTCTTGTGCGAGGCCGAGAAGCTATCCCTTGAATCCTTGTTGTATATTAAGTGGCTACTGGAAAAGTATAAAGGCTGTAATAAGGTCTTCTTTTGCTGCTCTGATGAATCAAAGCTGGAACCTGTCAAACCACTTTGTACTACTGTCCGCCTTTCACCACCCTCCTGCCAAGAGATTGTTAAGATGTTGGAATATATTGGAATAGAAGAAGGAATCAAATTATCACGCGACTTAGTCAAGAAGATAACTTTGAGATCCAATAACAATCTACGCCAAGCCATTCGTTCGTTGGAGGCCACTTGCCGAAACAAAGATTCCCTCAAAGACGACGATTTAATTTTAACCGGATGGGAAGAAGATATTTTCAGCATTGCCCACAAAATAACTGAAGAGCAGAGTCCAAGACAGTTGTACGTCATTCGTAGAAAGCTTCAAAGTCTTATGATTCATGATGTTCCTCCTGACTTTGTTTACAAGTTTTTGGTGGCAGAGTTAACGGCTCTAGTTGATGAGTCCCTACTGTCAGGGGTTGCCAAACTGGACAAGGAGTTCAATAGAGCTAGCGAATACAAATTTGAAACTACCAAGCAGTTTGGTCATCCTCAAAACAAACAAGCGGAATCAGATGAGAAGAACAACGAATCAACCACCAAAAAGTATGTGTTAACTTACTTAAAAGTCGAAGAGTTTATAGCGAAATTCATGAGCTGGTATAAGAAATCGTCTGAAAAAGGCAATAAGCAGAGCGAACAACTGATTGCTGGAAAATAG 2292 0.4228 MVSGEHSLSPKMKQPVSDQNVSKTHISPSRHSFRSKPSSKNGRSKRKNSGRPCTSVNLQAYDLNDQSSNSPYYKGLTDQSLAIVDTIASCPPPHAHPLLPSSPYYKGLTDYSLVIGPWNPSHHHHPIPPNNSLSYESSPYYLGLIDYSLALHSPPIQPPLRDSHSSFFSMNSAFYFKNRDEIIDKLSSPHCSLYPPQIKTGLSLKELMVDADVDVGVDVDVVDFLIEEKPLWERISEEGNVGNAFEEETNLGEMELIQEKPLRENIFLEETDTELVTKGVNDDVEMVIEERVLEASNAESELEENADETILEEMELMSDDVGLLIEEKALRERVSERSNVVEEMELKDHQKEKKASESEGGNVSEEGKVYLYTWAAKYQPFNLVDFICNRDKALYLKALVKDGCGCKHFIFEGPPNVGKRSMIRAMLREVFGADRVQVTQECKDFNLKGEMVDHLQVPVKKSLHHVEVNLSETKGYEKHVIVQLFKETYGITINNSLPCSSDNCQAIVLCEAEKLSLESLLYIKWLLEKYKGCNKVFFCCSDESKLEPVKPLCTTVRLSPPSCQEIVKMLEYIGIEEGIKLSRDLVKKITLRSNNNLRQAIRSLEATCRNKDSLKDDDLILTGWEEDIFSIAHKITEEQSPRQLYVIRRKLQSLMIHDVPPDFVYKFLVAELTALVDESLLSGVAKLDKEFNRASEYKFETTKQFGHPQNKQAESDEKNNESTTKKYVLTYLKVEEFIAKFMSWYKKSSEKGNKQSEQLIAGK* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1868 763 MobiDBLite consensus disorder prediction 702 722 - -
Apr5g1868 763 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 273 749 - -
Apr5g1868 763 PANTHER OS10G0574500 PROTEIN 273 749 - -
Apr5g1868 763 Coils Coil 339 359 - -
Apr5g1868 763 Gene3D - 371 561 IPR027417 -
Apr5g1868 763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 618 IPR027417 -
Apr5g1868 763 SUPERFAMILY post-AAA+ oligomerization domain-like 623 686 IPR008921 GO:0003677|GO:0006260
Apr5g1868 763 Gene3D - 562 622 - -
Apr5g1868 763 Gene3D - 623 745 - -
Apr5g1868 763 MobiDBLite consensus disorder prediction 10 35 - -
Apr5g1868 763 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1868 Apr-Chr5 21764167 21769877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1868 374 746 Core DNA Replication Machinery Family AT5G27740 29.894 2.34e-44 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1868 K10756 - gmx:102664389 788.104