Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1846 ATGGCTAAAATCATGGTGAATGCCACTCCTCCTCCCGCACTACCTTCCTGCATCTTCTTATTCATTATCTTTAGTTTGCTATCGCAAATCTTAGCGCAGGATCAAGTTTCCAAAACATTCATTTTCAGAATTGATTCCGAATCAAAGCCCTCTATTTTCCCAACCCATTATCATTGGTACACCGCCGAGTTCGCCGAGCCAACTCGCATCCTCCATCTGTACGACACCGTTTTCCACGGCTTCTCCGCGGTGTTAACACCACAACAAGTTGCATCCCTTGGCCAGCACCCCTCCGTGCTCGCGGTCTTCGAGGACCGTCGCCGGGTACTACACACCACTCGCTCCCCGCAGTTTCTTGGCTTGAGAAACCAGCGTGGCCTGTGGTCCGAATCCGATTACGGCTCCGACGTGATCATCGGAATCTTCGACACCGGAATTTGGCCGGAGCGGCGGAGCTTCAGCGATTCGAATTTAGGCCCCATTCCCAGACGCTGGAAAGGGGTGTGCGAGACGGGTGTGAAATTCTCACATAAAAATTGTAACAGGAAGCTGATTGGCGCGAGATTCTTCTCCAAAGGTCACGAGGCAAGTGGCGCATCCATCAACGACACCGTCGAGTTCCACTCTCCTCGAGATGCCGACGGCCACGGAACCCACACGGCGTCCACTGCCGCGGGTCGCTACGTTTTTGAAGCCAGCATGGAGGGCTACGCTTCTGGAATCGCGAAGGGTGTGGCTCCGAAAGCGCGACTGGCCATGTACAAGGTGTGCTGGAAGAACTCCGGTTGCTTCGATTCCGATATCCTCGCGGCATTCGACGCCTCCGTATCCGACGGTGTCGACGTCATTTCGATGTCAATTGGCGGCGGAGACGGCATCGCTTCCCCTTACTACCTGGACCCTATTGCGATCGGGTCTTACGGTGCAGTTTCAAGAGGAATTTTTGTGTCTAGTTCGGGTGGAAATGACGGGCCCAGTGGAATGTCGGTGACTAACCTCTCTCCATGGTTGACGACGGTGGGAGCGGGCACTATCGATCGTGATTTCCCGGCGGAGGTGATACTGGGCGACGGGCGTAGACTCTCCGGCGTGTCTCTTTACTCGGGAGCGCCGTTGAAGGAGAAAATGTATGAACTAATCTACCCTGGAAAATCTGGTGCTATTACGGATTCGCTGTGCATGGAGAATGCATTGGACCCAAACATGGTGAAGGGGAAGATAGTGGTTTGCGATCGAGGAAGTAGCCCTAGAGTTGCCAAGGGGCTGGTGGTGAAGAAAGCCGGTGGAGTGGGAATGATTCTGGCGAACGGCATTTCCAACGGCGAAGGTCTAATCGGCGACGCTCATCTTCTCCCCACTTGTGCTCTCGGTGCTGACGAGGGGGATGCCATCAAAGCATACATCTCTTCCTCTTCGAATCCAACAGCCACAATTGATTTCAAAGGCACTGTAATTGGAATTAAACCAGCACCAGTTGTGGCTTCTTTTTCGTCCAGGGGACCCAACGGGTTGAACCCGGAGATACTCAAACCGGATTTGATTGCTCCGGGAGTCAACATTCTGGCGGCTTGGACGGACGCGGTTGGTCCTTCGGGTTTGGATTCGGACCCTCGAAGAACCGAATTCAACATTTTGTCGGGTACCTCAATGGCTTGTCCTCACGTGAGTGGAGCAGCGGCATTGTTGAAATCTGCGCATCCTGATTGGAGCCCAGCGGCTATAAGATCGGCGATGATGACGACAGCGACGATCGTTGACAACACGAACCGCCTCATGACCGACGAAGCCACCGGCAATGGTTCCACGCCCTATGACTTTGGCGCTGGACATCTCAACCTGGGTCGTGCCATGGACCCTGGTTTGGTTTACGACATGACCAGTGATGATTACGTTACCTTCCTTTGCGGTATCGGTTATGGGCCCAACTTGATTCAGGTGATTACGCGTTCGCCGCCCAACTGTCCCCCGAGGAAGCCATTGCTGGAGAATCTGAATTACCCGTCGTTTGTTGTTCTGTTCCCGGTGTCGTCCAGAGGTTTGGCGAGGAAGACGTTCATGAGGACGGTGACGAACGTGGGCCCGAGAAATTCTGTTTATAGAGTGAGAGTGGAGTCGCAGTTGCAGGGGGTGACGGTGACAGTTAGGCCGTCACGACTTGTGTTTTCGGAGGCAGTGAAAAAGCGGAGGTTCGTGGTGACGGTGACGGCGGACACCCGGAATCTGGTGTTGGGTGAGTCCGGGGCGGCGTTCGGGTCGCTTTCTTGGACGGATGGGAAGCACATGGTTCGTAGCCCCATAGTGGTTACTCAAACCCAACCACTATAA 2325 0.5419 MAKIMVNATPPPALPSCIFLFIIFSLLSQILAQDQVSKTFIFRIDSESKPSIFPTHYHWYTAEFAEPTRILHLYDTVFHGFSAVLTPQQVASLGQHPSVLAVFEDRRRVLHTTRSPQFLGLRNQRGLWSESDYGSDVIIGIFDTGIWPERRSFSDSNLGPIPRRWKGVCETGVKFSHKNCNRKLIGARFFSKGHEASGASINDTVEFHSPRDADGHGTHTASTAAGRYVFEASMEGYASGIAKGVAPKARLAMYKVCWKNSGCFDSDILAAFDASVSDGVDVISMSIGGGDGIASPYYLDPIAIGSYGAVSRGIFVSSSGGNDGPSGMSVTNLSPWLTTVGAGTIDRDFPAEVILGDGRRLSGVSLYSGAPLKEKMYELIYPGKSGAITDSLCMENALDPNMVKGKIVVCDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLIGDAHLLPTCALGADEGDAIKAYISSSSNPTATIDFKGTVIGIKPAPVVASFSSRGPNGLNPEILKPDLIAPGVNILAAWTDAVGPSGLDSDPRRTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTATIVDNTNRLMTDEATGNGSTPYDFGAGHLNLGRAMDPGLVYDMTSDDYVTFLCGIGYGPNLIQVITRSPPNCPPRKPLLENLNYPSFVVLFPVSSRGLARKTFMRTVTNVGPRNSVYRVRVESQLQGVTVTVRPSRLVFSEAVKKRRFVVTVTADTRNLVLGESGAAFGSLSWTDGKHMVRSPIVVTQTQPL* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1846 774 Gene3D - 346 485 - -
Apr5g1846 774 SUPERFAMILY PA domain 402 472 IPR046450 -
Apr5g1846 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 768 IPR045051 -
Apr5g1846 774 CDD Peptidases_S8_3 110 583 IPR034197 -
Apr5g1846 774 Pfam Subtilase family 134 600 IPR000209 GO:0006508|GO:0008236
Apr5g1846 774 ProSiteProfiles Serine proteases, subtilase domain profile. 118 617 - -
Apr5g1846 774 Gene3D Peptidase S8/S53 domain 136 630 IPR036852 GO:0004252|GO:0006508
Apr5g1846 774 Pfam Fibronectin type-III domain 663 768 IPR041469 -
Apr5g1846 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 111 IPR037045 -
Apr5g1846 774 Pfam PA domain 390 464 IPR003137 -
Apr5g1846 774 Pfam Peptidase inhibitor I9 55 110 IPR010259 -
Apr5g1846 774 Gene3D - 634 771 - -
Apr5g1846 774 CDD PA_subtilisin_like 353 478 - -
Apr5g1846 774 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Apr5g1846 774 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Apr5g1846 774 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Apr5g1846 774 SUPERFAMILY Subtilisin-like 110 621 IPR036852 GO:0004252|GO:0006508
Apr5g1846 774 PANTHER XYLEM SERINE PROTEINASE 1 29 768 - -
Apr5g1846 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1846 Apr-Chr5 21600100 21602424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1846 18 774 Subtilisin-like Serine Gene Family AT4G34980 74.474 0.0 1187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1846 - - gmx:100792501 1318.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1846 5 21600100 21602424 Apr5g1846 5 21600100 21602424 ECH