Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1842 ATGGGTTCTGAGTTGATTGAAATTTCCACCGCCAGTAAATGGATGGGCTTCGTGGCGGCCGTGTGGATTCAGGCAATCTCCGGCAACAACTACACGTTCTCGAATTACTCGGACGCACTCAAATCACTCATGCATCTAACACAAATTGAGCTAAACAATCTCTCGGTTGCAAAAGACGTTGGAAAGGCTTTTGGGCTTCTTGCAGGCCTGGCCTCAGATCGATTGCCCACTTGGGCCATTCTCCTCATTGGCTCTCTCGAAGGCCTCATCGGATACGGCGTTCAGTGGCTTGTCGTGAGCCAGAGAATCCAACCCCTCCCCTACTGGCAGATGTGCATATTTCTATGTCTTGGGGGTAACAGCACAACATGGATGAACACCGCCGTTTTAGTCACCTGCATCCGCAACTTTCGCCGGAACAGAGGTCCAGTTTCCGGCATTCTCAAAGGCTATGTGGGGTTGAGCACCGCCATATTCACCGACCTGTGCTCTGCTCTCTTCGCCGACGACCCTGCCTCCTTCCTCCTCATGCTGTCTCTCGTCCCGTTCGCCGTTTGCCTCGCCGGCATCTTTTTCCTTCGCGAGGTTCCTCCCGCCAATTTCACCGTCGCCCAGGACAAGGAGGAGTCCAGGTACTTCAGCCTTTTCAATGCCGTCGCCGTCGTCGTCGCCGTTTACCTCTTGGCTTTCGGCTTCGTCCCGAACCCCGGCGTTTTGGCTTCTCGGTTGTTCGCTGTCGTTTTGCTCCTTTTATTGGCGGCGCCGTTGGGAATCCCGGTCCACTCTTACTTCAAAGCCCGCAGGTTGAACCGGTTGGAATCGGCCTTGGATGTGGAAGGGCGGGTGAACGAACCGTTGCTTCGAGGGCACCAGAAGGGAAGTGAAACAGAGGCGGAAGAGGCGGTGATGGAGAGGCGTGGACCGGCGGTGGGGGAGGAGCACACGATATGGGAGGCGCTGAAAACGGTGGATTTTTGGATTTTGTTTGTGTCGTTTCTGTGTGGGGTTGGAACCGGTTTGGCCGTTATGAACAATATGGGTCAAATCGGGTTGGCCCTCGGTTACTCGGACGTTTCCCTCTTCGTATCATTGACCAGTGTTTGGGGCTTTTTCGGTCGGATCATCTCGGGTTCGGTTTCGGAGTACTTCATCAAGAAAGCAGCAACTCCTAGACCTCTATGGAATGCAGCGTCTCAAATTCTGATGGCGGTGGGATACATACTCTTGGCCATGGCTATGCCTGGTTCCCTTTACATAGGGTCTACTGTAGTTGGAATATGCTATGGAGTTAGGTTGGCCATTACTGTCCCAACAGCCTCTGAGCTATTTGGCCTCAAATATTATGGTCTGATATACAACATTCTCATCCTTAACCTTCCACTTGGCTCTTTCCTCTTTTCTGGTCTGCTTGCTGGCATACTATACGATATGGAGGCAACTACCACCGCCGGAGGAGGCAACACTTGTGTTGGGGCTCATTGCTACAGACTAGTTTTCATAATCATGACTGCATCTTGCGTTGTTGGCTTCTTCTTAGATATTCTGTTGTCAATTAGAACCATAAAGGTTTATCACAAAATTTCCATCACCAAAAATTCCAAGAATGCCTCAGTCACACCAAGTACTTCATGA 1632 0.5141 MGSELIEISTASKWMGFVAAVWIQAISGNNYTFSNYSDALKSLMHLTQIELNNLSVAKDVGKAFGLLAGLASDRLPTWAILLIGSLEGLIGYGVQWLVVSQRIQPLPYWQMCIFLCLGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPASFLLMLSLVPFAVCLAGIFFLREVPPANFTVAQDKEESRYFSLFNAVAVVVAVYLLAFGFVPNPGVLASRLFAVVLLLLLAAPLGIPVHSYFKARRLNRLESALDVEGRVNEPLLRGHQKGSETEAEEAVMERRGPAVGEEHTIWEALKTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSVWGFFGRIISGSVSEYFIKKAATPRPLWNAASQILMAVGYILLAMAMPGSLYIGSTVVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTAGGGNTCVGAHCYRLVFIIMTASCVVGFFLDILLSIRTIKVYHKISITKNSKNASVTPSTS* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1842 543 Pfam Nodulin-like 13 260 IPR010658 -
Apr5g1842 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 536 - -
Apr5g1842 543 SUPERFAMILY MFS general substrate transporter 19 521 IPR036259 -
Apr5g1842 543 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 7 536 - -
Apr5g1842 543 Gene3D MFS general substrate transporter like domains 11 203 IPR036259 -
Apr5g1842 543 Gene3D MFS general substrate transporter like domains 318 522 IPR036259 -
Apr5g1842 543 CDD MFS_Mch1p_like 12 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1842 Apr-Chr5 21581548 21584375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1842 11 536 Nodulin-like Gene Family AT4G34950 68.402 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1842 - - gmx:100813607 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1842 5 21581548 21584375 Apr5g1842 5 21581548 21584375 ECH