Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1828 ATGGTGCCTATTGTTGATCGCATATATGCTTATTCACTGAAGTTGATATTATTAATTGCTCTATGCACATTATCAGATTGTTATGACCCGTTGGATCCAAATGGGAACATTTCTGTAACTTTTGACATTTACCAACGTACAGATAATGGATATCTGGCGAGGGTGACCCTTCAAAACCACTATCAATATCGCCATGTAGACAAACCTGGGTGGAGCCTAGGATGGACATGGGCTAACGATGAAGTGATCTGGTCAATGAACGGTGCCCTTGCAACTGATAGAGGGAATTGTTCATCTTACAGTGGCTCTCAGATGCCACATTCCTGCAAGAAAGATCCCTTCATAGTTGATCTCTCACCGGATGTCACACAAAACAGGTCAGAGCATTGCTGTCACGGTGGCCTCCTCTCTGCCTGGGCTATCGATCCTTTCAGTTCATTCTCTTCATTTGAACTTGACGTTCGCAACTTGAGGCAAAACCCACTTGGACAAATACCTAATAATCTTACATTGATGGCCCCAGGACCTGGTTACACTTGTAGCCCCCTTCTTGATACTGATCCCACTGTATCCTCAGACTTTGGGGGACTAAGACAAGTACCTGTTCTCAGAACTTGGAAGTCAACATGTGCATACTCAAGTTTCTTGGCAAACACACCACCAATGTGCTGTGTTTCCCTCTCATCATTTTACAATCCCAACATCACGCCGTGCCGTAATTGCAGTTGTGGATGCAGAGAAGCAAATATAAATACAGCATCTTGCATAAGGCCAAGTGATCCTTTACCACGGTCAGGTGAGGACAGCACAATTGAATGCACCAACCACATGTGCCCAATTCGTATCCATTGGCATTTCATGAACAACTATATGAATCAATGGAGGGTGAAGCTTACAGTTTCTAACTACAACTACAACAGAAACTACTCAAACTGGAACGTTCTGGCTCAACATCCTGGTTTCACCCAAAAAGCAACTACTTATAGCTTCAACAGCACTATACTTCCTGCCGTTGGCCTCAAAGATGGAGTTTACCTTTTTTGGGGGATAGATTTTTACAACAATGAGCTATTGCATTCTGATAAAGATCGAGTGGGTGGTGTGACAACAGAAATACTATTGGAAAAAGATACAAATTCTTTCACATTAAGTAACGGATGGGCATTTCCTAGAAGAATATATTTCAACGGGGAGAACTGTGAGATGCCTTTACCTGACACGTTTCCTATGTTACCAAATGGTAGCTCCAGTTTAACAAGTTACTGTGGTTTCAATCTTTTGTTGATATTTTTGTTTCTTACCCTTTGGTTTTGA 1314 0.4216 MVPIVDRIYAYSLKLILLIALCTLSDCYDPLDPNGNISVTFDIYQRTDNGYLARVTLQNHYQYRHVDKPGWSLGWTWANDEVIWSMNGALATDRGNCSSYSGSQMPHSCKKDPFIVDLSPDVTQNRSEHCCHGGLLSAWAIDPFSSFSSFELDVRNLRQNPLGQIPNNLTLMAPGPGYTCSPLLDTDPTVSSDFGGLRQVPVLRTWKSTCAYSSFLANTPPMCCVSLSSFYNPNITPCRNCSCGCREANINTASCIRPSDPLPRSGEDSTIECTNHMCPIRIHWHFMNNYMNQWRVKLTVSNYNYNRNYSNWNVLAQHPGFTQKATTYSFNSTILPAVGLKDGVYLFWGIDFYNNELLHSDKDRVGGVTTEILLEKDTNSFTLSNGWAFPRRIYFNGENCEMPLPDTFPMLPNGSSSLTSYCGFNLLLIFLFLTLWF* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1828 437 Pfam COBRA-like protein 51 213 IPR006918 GO:0010215|GO:0031225
Apr5g1828 437 PANTHER COBRA-LIKE PROTEIN 13 434 - -
Apr5g1828 437 PANTHER PROTEIN COBRA 13 434 IPR006918 GO:0010215|GO:0031225
Apr5g1828 437 PIRSF COBRA 2 437 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1828 Apr-Chr5 21502415 21504668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1828 8 433 COBRA Gene Family AT3G02210 46.032 1.47e-138 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1828 - - vra:106760500 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1828 5 21502415 21504668 Apr5g1828 5 21502415 21504668 ECH