Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1825 ATGGGTTTCAGCTTGCGTGGTCTTCAAAGGCGTGTGGATGTCCCAAAGGGTTGTCTAGCAGTGTACGTAGGAGAAAACCAGAAGAAGCGCTTTGTGGTTCCCATATCATACTTGAACCAACCTTCATTTCAGGAGTTGCTGAGTCAAGCTGAACAAGAATTTGGATTTGATCATCCAATGGGTGGCCTCACAATTCCATGCAGAGAAGATTGTGTGAATAAACATAAAACAATGGGTTTTCGCTTACCTGGTATTAGACGATCAACATCTAGTGCAAGTCAACAATCTTCTTGCAAGGTGATGGAAGTCCCCAAAGGATATCTTGCGGTGTATGTTGGAGAGAAGATGAAGAGGTTCTTGATTCCAGTATCGTTCTTGAATGAACCTTTATTTCAAGAATTGCTGAGCCAAGCTGAAGAGGAATTTGGTTACTCTCATCCAATGGGTGGTCTCACAATTCCCTGCAAGGAAGATGAATTCTTAGATATAACTTCTCGCTTGAACCAGCTATGA 513 0.425 MGFSLRGLQRRVDVPKGCLAVYVGENQKKRFVVPISYLNQPSFQELLSQAEQEFGFDHPMGGLTIPCREDCVNKHKTMGFRLPGIRRSTSSASQQSSCKVMEVPKGYLAVYVGEKMKRFLIPVSFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDEFLDITSRLNQL* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1825 170 PANTHER AUXIN-INDUCED PROTEIN 10A5 78 169 - -
Apr5g1825 170 PANTHER AUXIN-INDUCED PROTEIN 10A5 6 71 - -
Apr5g1825 170 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 78 169 IPR003676 GO:0009733
Apr5g1825 170 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 71 IPR003676 GO:0009733
Apr5g1825 170 Pfam Auxin responsive protein 87 166 IPR003676 GO:0009733
Apr5g1825 170 Pfam Auxin responsive protein 12 72 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1825 Apr-Chr5 21478065 21482249 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1825 13 68 Calmodulin-binding Proteins AT3G43120 55.357 3.50e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1825 - K14488 aip:110269930 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1825 5 21478065 21482249 Apr5g1825 5 21478065 21482249 ECH