Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1824 ATGGGCTTCCGTTTACCTGCTATTAGACGGGTTTCATTTACTGGTAGCCAAGCATCTTCAAAATCCGTGAATGTGCCAAAGGGATACCTTGCAGTGTATGTAGGAGAAAAAATGAAGCGGTTTGTTATCCCCATGTCATACTTGAACCAAACTTCATTTCAAGGCTTGCTGATTCAAGCAGAGGAAGAATTTGGATATGATCATCCAATGGGTGGTCTTACAATTCCTTATCATTCTTTGTGTGAAGAAACAATGGGTTTTCGCTTACCTGGTATTAGACGATCATTCTCTAGTTCAAACCAACAATCTTCTTGCAAGGTGATGGAAGTCCCAAAAGGGTATCTTGCAGTGTATGTTGGAGAGAACATGAAGAGGTTCTTGATTCCAGTATCATTCTTGAATGACCTTTTATTTCAAGAATTGCTTAGCCAAGCTGAAGAGGAGTTTGGTTACTCTCATCCTATGGGTGGTCTTACAATACCATGCAAGGAAGATGAGTTCTTAGATATAACCTCTCGCTTGAACCGGCTATGA 534 0.4064 MGFRLPAIRRVSFTGSQASSKSVNVPKGYLAVYVGEKMKRFVIPMSYLNQTSFQGLLIQAEEEFGYDHPMGGLTIPYHSLCEETMGFRLPGIRRSFSSSNQQSSCKVMEVPKGYLAVYVGENMKRFLIPVSFLNDLLFQELLSQAEEEFGYSHPMGGLTIPCKEDEFLDITSRLNRL* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1824 177 Pfam Auxin responsive protein 11 79 IPR003676 GO:0009733
Apr5g1824 177 Pfam Auxin responsive protein 96 173 IPR003676 GO:0009733
Apr5g1824 177 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 7 78 IPR003676 GO:0009733
Apr5g1824 177 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 86 176 IPR003676 GO:0009733
Apr5g1824 177 PANTHER AUXIN-INDUCED PROTEIN 10A5 7 78 - -
Apr5g1824 177 PANTHER AUXIN-INDUCED PROTEIN 10A5 86 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1824 Apr-Chr5 21475075 21477076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1824 14 93 Calmodulin-binding Proteins AT3G43120 48.148 9.37e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1824 - K14488 aip:110269930 246.128