Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1823 ATGGGTTTCCGTTTACCTGGTATTAGACAAGCAACACTATCTACAACCCAAAATGAAACTAAGGGGGTTGAAGTCCAAAAAGGCTATCTTGCAGTCTATGTTGGAGATAACATGAGGCGGTTTGTGATTCCTATATCATACCTGAACCAACCCTCATTTCAAGATTTACTGAGTCAATCAGAAGAAGAATTTGGATATTCTCATCCCACGGGTGGTCTCACAATTCCATGCAGGGAGGATGCTTTCCTAGACATCACTTCAACATTTGAAATTGGTTTCCGTTTACCTTCTATCAGACGAGCTTCGTTTGTTGCTAGCCAAGCATCTTTAAAAGTCGTGAATGTGCCCAAGGGCTATGTTGTGGTGTATGTAGGAGAGAAAATGAAGCGGTTTTTGATCCCCATGTCATACTTGAACCAACCTTCATTTCAAGACTTGCTGCGTCGAGCAGAGGAAGAATTTGGATATGATCATCCAACAGGTGGTCTCACAATTCCTTGCACAGAAGATGTCTTCCTGCATATTACTTCTTGGTTGAATGGTCTATAA 549 0.4171 MGFRLPGIRQATLSTTQNETKGVEVQKGYLAVYVGDNMRRFVIPISYLNQPSFQDLLSQSEEEFGYSHPTGGLTIPCREDAFLDITSTFEIGFRLPSIRRASFVASQASLKVVNVPKGYVVVYVGEKMKRFLIPMSYLNQPSFQDLLRRAEEEFGYDHPTGGLTIPCTEDVFLHITSWLNGL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1823 182 PANTHER AUXIN-INDUCED PROTEIN 6B 95 180 - -
Apr5g1823 182 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Apr5g1823 182 Pfam Auxin responsive protein 109 178 IPR003676 GO:0009733
Apr5g1823 182 Pfam Auxin responsive protein 15 87 IPR003676 GO:0009733
Apr5g1823 182 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Apr5g1823 182 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 95 180 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1823 Apr-Chr5 21470698 21473286 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1823 14 82 Calmodulin-binding Proteins AT3G43120 47.826 3.56e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1823 - K14488 aip:110269930 218.009