Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1821 ATGGGTTTCCACTTAAAGGGGTTGAAGGGTATTAGACGATCATCACTACCTACAACCCAAACAGCATCTAAAGGGGTTGAAGTCCCAAAAGGATATCTTGCTGTCTATGTTGGAGATAACATGAGGCGGTTTGTGATTCCTATATCATACTTGAACCAACCTTCATTTCAAGATTTATTGAGTCAATCAGAAGAAGAATTTGGATATTCTCATCCCAGAGGTGGCCTCACAATTCCATACGAGAACTTCACCTTGTTCTTCAAAACATTTGAAATGGGTTTCCATTTACCTTCCATTAGAAGGGCTTCATTTACTGGTAGCCAAGCATCTTCAAAAGTTGTGAATGTGCCAAAGGGCTATCTTGCCGTGTATGTAGGAGAGAAAATGAAGCGTTTTGTGATCCCCATCTCATACCTAAACCAACCTGCATTTCAAGAATTACTAAGTCAAGTAGAGGGAGAATTTGGACATGACCATCCAAGGGGTGGTCTCACCATTCCATGCATGGAAGATGTCTTCTTGCAAGTTACATCTCAATTGAATGAGCTATAA 552 0.4058 MGFHLKGLKGIRRSSLPTTQTASKGVEVPKGYLAVYVGDNMRRFVIPISYLNQPSFQDLLSQSEEEFGYSHPRGGLTIPYENFTLFFKTFEMGFHLPSIRRASFTGSQASSKVVNVPKGYLAVYVGEKMKRFVIPISYLNQPAFQELLSQVEGEFGHDHPRGGLTIPCMEDVFLQVTSQLNEL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1821 183 Pfam Auxin responsive protein 13 82 IPR003676 GO:0009733
Apr5g1821 183 Pfam Auxin responsive protein 106 178 IPR003676 GO:0009733
Apr5g1821 183 PANTHER AUXIN-INDUCED PROTEIN 10A5 99 182 - -
Apr5g1821 183 PANTHER AUXIN-INDUCED PROTEIN 10A5 10 82 - -
Apr5g1821 183 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 99 182 IPR003676 GO:0009733
Apr5g1821 183 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 10 82 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1821 Apr-Chr5 21459810 21463884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1821 5 91 Calmodulin-binding Proteins AT3G43120 43.820 1.17e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1821 - K14488 aip:110269930 233.032