LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr5g1820	ATGGGTTTTCGCTTACCAGGTATTAGACGATCATCATTTAGTGCATGCCAAGTATCTTCTTGCAAGGCAGTAGAAGTCCCAAAAGGGTATCTTGCAGTGTATGTTGGTGAGAAAATGAAGAGGTTCTTGATTCCAGTATCATTCTTGAACGAGCCTTTATTTCAGGAATTGCTTAACCAAGCTGAAGAGGAATTTGGTTACAATCATCCCATGGGTGGTCTCACAATTCCCTGCAAGGAGGATGTCTTCCAAACAGAAAACAAGACAATGGGTTTTCGCTTACCAGGTATTAGACGATCATCATTTAGTGCATGCCAAGTATCTTCTTGCAAGGCAGTGGAATTTCCAAAAGGGTATCTTGCAGTGTATGTTGGTGAGAAAACGAAGAGGTTCTTGATTCCAGTATCATTCTTGAACGAGCCTTTATTTCAAGAATTGCTTAACCAAGTTGAAGAGGAATTCGGTTACAATCATCCTATGGGTGGTCTCACAATTCCCTGCAAGGAGGATGTGTTCTTGGATATAGCTTCTTGCTTGAACCGGCTATAA	549	0.4135	MGFRLPGIRRSSFSACQVSSCKAVEVPKGYLAVYVGEKMKRFLIPVSFLNEPLFQELLNQAEEEFGYNHPMGGLTIPCKEDVFQTENKTMGFRLPGIRRSSFSACQVSSCKAVEFPKGYLAVYVGEKTKRFLIPVSFLNEPLFQELLNQVEEEFGYNHPMGGLTIPCKEDVFLDIASCLNRL*	183

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr5g1820	182	PANTHER	SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN	2	85	-	-
	Apr5g1820	182	PANTHER	SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN	91	180	-	-
	Apr5g1820	182	Pfam	Auxin responsive protein	10	84	IPR003676	GO:0009733
	Apr5g1820	182	Pfam	Auxin responsive protein	98	179	IPR003676	GO:0009733
	Apr5g1820	182	PANTHER	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	91	180	IPR003676	GO:0009733
	Apr5g1820	182	PANTHER	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	2	85	IPR003676	GO:0009733

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr5g1820	Apr-Chr5	21454472	21458014	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr5g1820	25	84	Calmodulin-binding Proteins	AT3G43120	56.667	1.75e-18	76.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr5g1820	-		K14488	aip:110269930	242.276

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr5g1820	5	21454472	21458014	Apr5g1820	5	21454472	21458014	ECH