Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1819 ATGGCTATTCGTTTGCTTAGAGTTTTGAGTGCTAAGCACCTTCTTCGCCGAACTAATCTGTTTGCAAATCATGCAGCTCCAACATCATTGGATGTGCCTAAAGGGCACTTTGCTGTGTATGTAGGAGAGGGTGAAAAGAAGAGATATGTAATACCAGTGTCATTGTTGAATGAACCTTCATTTCAAGAACTGCTAGATATAGCGGAGGAAGAATTTGGCTTCACTCATCCAATGGGTGGCCTTACAATTCCCTGCACAGAAGACATTTTCAACCTCTTCCAAGTTCTATCCAATACTACTGGGATGGCTATTCGTTTGCCTAGTGTTTTGAGTGCTAAACACATTCTTCGCCGATCTAATCTATTTGCAAACCATGCAGCTTCAACATCATTAGATGTGCCTAAAGGGCACTTTGCTGTGTACGTAGGCGAGAGTGAGAAGAAGAGATTTGTGATACCAGTGTCATTGTTGAATCAGCCTTCATTTCAAGAACTATTAAGTATAGCGGAGGAAGAATTTGGCTTCAGCCATCCAATGGGTGGCCTTACAATTCCATGCACAGAAGACATTTTCGTTAACATCACCTCTGGCTTACATAGACTATGA 606 0.4191 MAIRLLRVLSAKHLLRRTNLFANHAAPTSLDVPKGHFAVYVGEGEKKRYVIPVSLLNEPSFQELLDIAEEEFGFTHPMGGLTIPCTEDIFNLFQVLSNTTGMAIRLPSVLSAKHILRRSNLFANHAASTSLDVPKGHFAVYVGESEKKRFVIPVSLLNQPSFQELLSIAEEEFGFSHPMGGLTIPCTEDIFVNITSGLHRL* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1819 201 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 127 198 IPR003676 GO:0009733
Apr5g1819 201 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 26 90 IPR003676 GO:0009733
Apr5g1819 201 Pfam Auxin responsive protein 117 195 IPR003676 GO:0009733
Apr5g1819 201 Pfam Auxin responsive protein 24 91 IPR003676 GO:0009733
Apr5g1819 201 PANTHER - 127 198 - -
Apr5g1819 201 PANTHER - 26 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1819 Apr-Chr5 21442959 21446948 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1819 3 90 Calmodulin-binding Proteins AT4G34750 42.045 2.68e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1819 - K14488 aprc:113865304 400.979