Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1814 ATGGCTGCGCCAAACCTCTCCACCCTCTCCAAACCCTCCCCTCTCCCTTTCAACGCCAACACCACCTCATTTTTCACCCTCCAAAACCCCACCCTCTTCCCCAAAACCTCTCTTTCTCACAAGACCCATTCCCCTTTTCCCCTCTCATGCAATTCCAATAACCCAAACAACACCTTCCCCGAAAAGCTCCGCGAAGAGTGCGGCGTCGTGGGCATATACGGCGATCCAGAGGCTTCCCGTCTCTGCTACCTCGCCCTGCATGCCCTCCAACACCGTGGCCAAGAAGGTGCCGGAATCGTCGCCGTCCACAATAACCTCCTCCAATCCATAACCGGCGTTGGCCTCGTTTCCGAAGTCTTCAACGAGTCCAAACTCGATCAATTACAGGGAACATTAGCCATAGGGCATGTCCGGTACTCAACCGCAGGCCAATCCATGCTCAAGAACGTTCAACCCTTCGTGGCAGGGTACCGCTTCGGCTCTGTCGGAGTGGCCCACAACGGGAACTTGGTAAACTATCGCTCCTTAAGGGACAAACTCGAAGACAACGGGTCCATCTTCAACACGACTTCTGACACAGAGGTAGTGCTCCATCTTATTGCGACGTCCAAACACAGACCCTTTCTCTTGAGAATCGTCGACGCCTGCGAGAAGCTTCAAGGGGCATATTCTTTGGTGTTCGTCACGGAGGATAAGCTGGTGGCAGTAAGAGATCCCTTCGGGTTCCGACCATTGGTGATGGGAAGAAGAAGAAACGGCGCTGTCGTTTTTGCGTCGGAGACATGTGCCCTTGATTTGATCGAAGCGACATACGAGAGGGAAGTGTACCCGGGAGAGGTTTTAGTGGTTGATGAAAACGGCCTTCAATCGCTTTGCTTAGTCTCTCATCCAAACCCAAAGCAATGCATATTCGAGCATATATATTTCGCGCTTCCGAATTCCATTGTTTTCGGAAGGTCCGTTTACGAGTCTCGAAGGAAATTCGGGGAAATATTAGCGACAGAGAGTCCCGTTGAGTGTGACGTTGTTATAGCAGTGCCAGATTCAGGGGTTGTGGCTGCGCTTGGTTATGCTGCAAAAGCTGGTGTTCCTTTTCAACAAGGGTTGATTCGGTCACACTATGTGGGGAGGACTTTTATTGAACCGTCGCAAAAGATAAGAGACTTTGGAGTGAAGTTGAAGCTGTCTCCGGTTCGTGGTGTGCTTGAAGGGAAGAGGGTCGTGGTTGTGGATGATTCGATTGTGAGGGGAACGACGTCGTCGAAAATAGTGAGGTTGATAAGGGAAGCAGGTGCGAAAGAGGTTCACATGAGGATTGCGTGTCCACCAATAATTGCTTCGTGTTATTATGGGGTTGACACGCCCAGCTCCCAAGAGTTGATTTCTAATAGGATGGGTGTGGAGGAAATAAGAGACTTTATTGGCTCTGATTCGCTTGCTTTTCTACCGTTGGATAGTTTGAAGATGTTGTTGGGCAGTGATTCTCCTAATTTCTGTTTTGCTTGCTTCTCTGGGAAGTACCCCGTTGAACCCACCCAACTTAAAATGAAGAGGTTTGGTGATTTATTGGACGATGGGTTCAATGGGGTTAGAAATCAGACGGAGCTGAAGATTGTTAGTCTCTGA 1626 0.4988 MAAPNLSTLSKPSPLPFNANTTSFFTLQNPTLFPKTSLSHKTHSPFPLSCNSNNPNNTFPEKLREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVAVHNNLLQSITGVGLVSEVFNESKLDQLQGTLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRSLRDKLEDNGSIFNTTSDTEVVLHLIATSKHRPFLLRIVDACEKLQGAYSLVFVTEDKLVAVRDPFGFRPLVMGRRRNGAVVFASETCALDLIEATYEREVYPGEVLVVDENGLQSLCLVSHPNPKQCIFEHIYFALPNSIVFGRSVYESRRKFGEILATESPVECDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRGVLEGKRVVVVDDSIVRGTTSSKIVRLIREAGAKEVHMRIACPPIIASCYYGVDTPSSQELISNRMGVEEIRDFIGSDSLAFLPLDSLKMLLGSDSPNFCFACFSGKYPVEPTQLKMKRFGDLLDDGFNGVRNQTELKIVSL* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1814 541 TIGRFAM purF: amidophosphoribosyltransferase 67 508 IPR005854 GO:0004044|GO:0009113
Apr5g1814 541 CDD PRTases_typeI 329 440 IPR000836 -
Apr5g1814 541 Hamap Amidophosphoribosyltransferase [purF]. 66 507 IPR005854 GO:0004044|GO:0009113
Apr5g1814 541 Pfam Phosphoribosyl transferase domain 325 437 IPR000836 -
Apr5g1814 541 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 67 290 IPR029055 -
Apr5g1814 541 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 22 533 - -
Apr5g1814 541 Gene3D - 326 490 IPR029057 -
Apr5g1814 541 PIRSF Pur1 63 521 IPR005854 GO:0004044|GO:0009113
Apr5g1814 541 Pfam Glutamine amidotransferase domain 145 264 IPR017932 -
Apr5g1814 541 SUPERFAMILY PRTase-like 302 513 IPR029057 -
Apr5g1814 541 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 67 508 IPR029055 -
Apr5g1814 541 CDD GPATase_N 67 317 IPR035584 -
Apr5g1814 541 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 22 533 - -
Apr5g1814 541 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 67 286 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1814 Apr-Chr5 21411592 21413563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1814 42 529 PRT Gene Family AT2G16570 82.653 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1814 K00764 - gmx:100791919 875.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1814 5 21411592 21413563 Apr5g1814 5 21411592 21413563 ECH