Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1785 ATGGCTTCCCCAAGCGGAACCTCTTCAGGGTCCTCTATGATTCAAAACTCTGGCTCAGAGGAGGACCTGCAGGCGTTGATGGATCAGAGGAAGAGGAAGAGAATGCTATCAAACCGTGAATCTGCAAGGCGATCTCGAATGAGGAAACAGAAGCACTTGGATGATCTTGCTGCACTCGTGGCTCAGCTCAGGAACGAGAATCACCAGATGCTGACATCAGTTAACCTCACTACCCAAAAGTACTTGGCTGTCGAGGCTGAAAACTCGGTTCTGAGAGCTCAAGTGGGTGAGTTAAGCCACAGATTGGAGTCTTTGAACGAGATCATCGAGTTCTTGAATGCCACCAATGGGGTTTTTGGGCCTGCTGGACCACCGGTACCGGCCTCCTTCTATGAGCCCGATTATGGGTTCTTCAACAACCCTTTGAATATGGCATATCTGAACCAGCCCATCATGGCTTCTGCAGATCACATGTTGCAGTACTGA 486 0.4979 MASPSGTSSGSSMIQNSGSEEDLQALMDQRKRKRMLSNRESARRSRMRKQKHLDDLAALVAQLRNENHQMLTSVNLTTQKYLAVEAENSVLRAQVGELSHRLESLNEIIEFLNATNGVFGPAGPPVPASFYEPDYGFFNNPLNMAYLNQPIMASADHMLQY* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1785 161 MobiDBLite consensus disorder prediction 24 50 - -
Apr5g1785 161 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
Apr5g1785 161 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Apr5g1785 161 Gene3D - 28 83 - -
Apr5g1785 161 MobiDBLite consensus disorder prediction 1 23 - -
Apr5g1785 161 Pfam bZIP transcription factor 30 79 IPR004827 GO:0003700|GO:0006355
Apr5g1785 161 PANTHER BZIP TRANSCRIPTION FACTOR 1 157 - -
Apr5g1785 161 MobiDBLite consensus disorder prediction 1 50 - -
Apr5g1785 161 Coils Coil 95 115 - -
Apr5g1785 161 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Apr5g1785 161 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 157 - -
Apr5g1785 161 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Apr5g1785 161 Coils Coil 46 66 - -
Apr5g1785 161 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1785 Apr-Chr5 21182240 21183631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1785 24 159 bZIP Transcription Factor Family AT4G34590 58.865 2.75e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr5g1785 bZIP_1 9.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1785 K25786 - gmx:778171 215.312