Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1763 ATGGGCATAGTGTGGTTTGGGCTGTTGTTCTTGCTGCTGAGTCAGGTGACATTGGAGCAGATTGAGCCACTGAGTTCAGCGAGTGAGCGAGAAGCACTGCTCCAACTGAGGGCTTCTCTGGGGTTGAGGAGCAAGGAATGGCCAAGAAAGCCAGACCCATGTTTAATCTGGGAGGGCATCGCTTGTCAGAATGGTCGAGTTGTTAAGATCAATATCTCTGGTTTCAGAAGAACCCGTCTTGGGAGGAGAAACCCACAGTTTGCAGTGGATGCTTTGGCCAATCTCACTCTCTTGCAGACCTTCAATGCCTCCAATTTCCTCCTCCCTGGTCCTATTCCTGATTGGTTTGGTCTTAGACTCCCTTCACTTAGAGTGCTTGATCTTCGTTCTTGCTCCATTGTTAGTGCTATTCCTTCTACTCTTGGCAATTTAACCAACCTCACTAGTCTTTATCTTTCTGACAACAAACTCACTGGGACTGTTCCTGATAGTTTGGGTCAACTCTTGGCCCTCTCCGTTCTTGATCTTTCCGGGAATTCTCTTTCAGGCTTCATACCAACCTCTTTTGCCTTTCTTGCAAATCTTTCTTCCCTCGACATGTCTGAGAATTTTTTGTCTGGGCCGATTCCACCCGGCATAGGGACCCTCTCCAGGTTACAATACTTGAATCTTTCTAGCAATGACCTCACTTCTTTGCCTTCCCAATTGGGGGGTCTTACTAGCTTAGTTGATCTTGATCTTAGTGAGAATTCTTTCTCTGGTGGACTTCCTCCGGCTTGGAATGGGTTCAGGAACTTGCGTAGAATGGTGCTTGCAAAGAGTATGCTCAATGGACCTCTGCCCAGGAACTTGTTTACTGCTTCATTGCAGTTGCAGTCCCTAGTGCTGAGGCAAAACAATTTCACTGGTTCTTTGCCTGTTGAGCTGTGGTCTCTGCCAAGTTTGACCTTGGTCGACGTGTCTGCCAACAATTTTAGCAGTCTGCTTCCTAATTCTAGTTCAGCTGCTAATGCTACTGTTTTGGTGCTCAATATTTCTCATAATCGGTTTTATGGAGGCCTCAGTCCTTTGCTCAGAAGGTTTGGTTTTGTGGATCTTTCAAACAATTATTTTGAGGGCAAGGTTCTGGATTTCATGCATAATGTATCACTAAACAGCAACTGCCTCCAAAATGTGACAAATCAGAGGACACCGGTGGAATGTGCATCGTTTTATGCGGCAAGAGGCCTCAGTTTTGATAATTTTGGACAGCCAAATACGACAAAACCTCCTGTAACGGATAACTCTGGGAAGAGCAATAAAATTAAGATTATATTGGCAGCAGTCTTGGGTGGGGTGGGTTTAATTGCACTTTTGGTGTTGCTACTGGTACTGTTGCTTCTATGTGCTCGTAAGAGAGGCAATTCAAGTCATAGGGGAAATGGTGTGGGTCCTGCTCCTGCTGGCGCCAGTCCTCCAAATCCTGCTGTATCAACTAACTTTCCAAATGTAGGAGACTCTTTTACATATCATCAGTTGCTCCAGGCAACAGGAGATTTCAATGATGCAAATCTTATCAAACATGGCCACACTGGGGATTTCTTCTATGGTGTTTTGGAAAGTGGGATTCCTATCGTAATCAAAAGGATTGACACGCGTTCAACTAAAAAGGAAGCTTACCTGTCAGAATTGGACTTTTTCAATAAGGCTTCTCATCAAAGATTTGTACCCCTGTTAGGTCATTGCTTAGAAAATGAGAATGAAAAGTTCCTGGTTTATAAACACATGCCAAATGGGGACTTGTCTAATTGCTTGTACTACAAAAATACTACATCTGATGATGGTAGTTTGCAGTCATTGGACTGGATAACTAGGTTAAAAATTGCTACCGGAGCAGCAGAGGCTCTATCATATCTGCATCATGAATGTGTTCCACCCATTGTTCACAGAGATATTCAAGCGAGTAGTATACTTCTAGATGACAAATATGAAGTTCGATTAGGGAGTCTAAGTGAAGCTTGCATTCAAGAAGGTGATACACATCAAAGTAAAATCACCCGGTTTCTGCGGTTGCCTCAGTCCTCTGAGCAAGGCACATCTGGTTCATCAACATCAGTTTGTGCCTACGACGTCTTTTGCTTTGGGAAAGTGTTACTTGAGCTGGTGACCGGTAAGCTGGGAATCAGTGCATCCAGTGACAGTGAAGTAAAGGAATGGTTCGATCAGATTCTTCCTTGCATTAGTATGTATGACAAGGAGCTTGTGACAAAAATTGTTGACCCATCTATGGTTGTTGATGAGGATTTCTTAGAGGAAGTATGGGCTATAGCCATTGTTGCCAGGTCCTGCCTAAATCCAAAACCTTCAAGAAGACCCCCAATGAGATATATTCTCAAGGCTTTGGAAAACCCTTTAAAAGTTGTGAGGGAAGAAAATTCCAGTTCCGCACGGCTTAGAGCAACCTCTTCAAGAGGCTCTTGGAATGCTACTCTGTTTGGCAGTTGGCGTCAGAGTTCATCTGATGTAGCAGCAACTCCAGCAGCAGCCTCTGGTCCAAAATTAGAAGGAACTAGTAGTTTAAAGCTTTCAGAAACTACCGGCTCGCAGTCACAGGGTAGCTTCCACAATGGAGGGGGTGATGTTTCATCATCTAGGAGACGTCATTCAAAGGAGATATTCCCAGAGCCATCAGTCTCACATGAGGTGGAGAGGTTGGACTTGGAATAG 2706 0.4442 MGIVWFGLLFLLLSQVTLEQIEPLSSASEREALLQLRASLGLRSKEWPRKPDPCLIWEGIACQNGRVVKINISGFRRTRLGRRNPQFAVDALANLTLLQTFNASNFLLPGPIPDWFGLRLPSLRVLDLRSCSIVSAIPSTLGNLTNLTSLYLSDNKLTGTVPDSLGQLLALSVLDLSGNSLSGFIPTSFAFLANLSSLDMSENFLSGPIPPGIGTLSRLQYLNLSSNDLTSLPSQLGGLTSLVDLDLSENSFSGGLPPAWNGFRNLRRMVLAKSMLNGPLPRNLFTASLQLQSLVLRQNNFTGSLPVELWSLPSLTLVDVSANNFSSLLPNSSSAANATVLVLNISHNRFYGGLSPLLRRFGFVDLSNNYFEGKVLDFMHNVSLNSNCLQNVTNQRTPVECASFYAARGLSFDNFGQPNTTKPPVTDNSGKSNKIKIILAAVLGGVGLIALLVLLLVLLLLCARKRGNSSHRGNGVGPAPAGASPPNPAVSTNFPNVGDSFTYHQLLQATGDFNDANLIKHGHTGDFFYGVLESGIPIVIKRIDTRSTKKEAYLSELDFFNKASHQRFVPLLGHCLENENEKFLVYKHMPNGDLSNCLYYKNTTSDDGSLQSLDWITRLKIATGAAEALSYLHHECVPPIVHRDIQASSILLDDKYEVRLGSLSEACIQEGDTHQSKITRFLRLPQSSEQGTSGSSTSVCAYDVFCFGKVLLELVTGKLGISASSDSEVKEWFDQILPCISMYDKELVTKIVDPSMVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYILKALENPLKVVREENSSSARLRATSSRGSWNATLFGSWRQSSSDVAATPAAASGPKLEGTSSLKLSETTGSQSQGSFHNGGGDVSSSRRRHSKEIFPEPSVSHEVERLDLE* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1763 901 Gene3D Transferase(Phosphotransferase) domain 1 589 816 - -
Apr5g1763 901 MobiDBLite consensus disorder prediction 874 901 - -
Apr5g1763 901 SMART LRR_typ_2 144 167 IPR003591 -
Apr5g1763 901 SMART LRR_typ_2 120 143 IPR003591 -
Apr5g1763 901 SMART LRR_typ_2 216 239 IPR003591 -
Apr5g1763 901 SMART LRR_typ_2 168 191 IPR003591 -
Apr5g1763 901 SMART LRR_typ_2 312 335 IPR003591 -
Apr5g1763 901 MobiDBLite consensus disorder prediction 849 873 - -
Apr5g1763 901 SUPERFAMILY Protein kinase-like (PK-like) 487 794 IPR011009 -
Apr5g1763 901 Gene3D Ribonuclease Inhibitor 26 189 IPR032675 -
Apr5g1763 901 ProSiteProfiles Protein kinase domain profile. 513 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1763 901 Pfam Protein tyrosine and serine/threonine kinase 519 792 IPR001245 GO:0004672|GO:0006468
Apr5g1763 901 PANTHER BNAA07G03560D PROTEIN 8 184 - -
Apr5g1763 901 PANTHER BNAA07G03560D PROTEIN 181 843 - -
Apr5g1763 901 SUPERFAMILY L domain-like 85 413 - -
Apr5g1763 901 MobiDBLite consensus disorder prediction 836 901 - -
Apr5g1763 901 ProSiteProfiles Leucine-rich repeat profile. 218 240 IPR001611 GO:0005515
Apr5g1763 901 MobiDBLite consensus disorder prediction 469 490 - -
Apr5g1763 901 Gene3D Phosphorylase Kinase; domain 1 488 588 - -
Apr5g1763 901 PANTHER RECEPTOR-LIKE PROTEIN 55 181 843 - -
Apr5g1763 901 PANTHER RECEPTOR-LIKE PROTEIN 55 8 184 - -
Apr5g1763 901 PRINTS Leucine-rich repeat signature 171 184 - -
Apr5g1763 901 PRINTS Leucine-rich repeat signature 216 229 - -
Apr5g1763 901 Gene3D Ribonuclease Inhibitor 190 404 IPR032675 -
Apr5g1763 901 Pfam Leucine rich repeat 145 203 IPR001611 GO:0005515
Apr5g1763 901 Pfam Leucine rich repeat 215 251 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1763 Apr-Chr5 21050423 21055965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1763 25 686 Miscellaneous Gene Families AT2G16250 56.951 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Apr5g1763 PK_Tyr_Ser-Thr 1.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1763 - - gmx:100805769 1431.39