Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1759 ATGGCTTCAAATTCCCCAACGGCATCTCCACCTGATTCATCTTCTCCACAATCCCCGCCACCACCATCATCTGCACCTGCACCATCCCAAGATAATTCATCATCACCGCCACCCTCTTCATCACCCCCACCACCATCATCTCCACCGCCTTCGTCACCTCCTCCGCCATCAGCCCCACCACCAGTACCAGGTGATCAAAATTCTTCACCTCCACCACCGTCATCATCACCATCACCACCACCACCAGTAGCAGGTGATCAAAATTCTTTACCCCCACCGTCTGGCTCCTCCTCTTCATCTCCACCTCCTCCTCCTCCTCCTGAAAAGAAATCAGGAAGTCACCCGCCTCCACCCCCATCGAGCCAAGCTTTTTCTCCTCCTCCAACCCCCCACCATCGATTGTCTCCACCCACTAAGTCATCGAGCTCAAGTCTTGCCAATGCATCTCCGGATAGTGGAAGCCACTCAAACTTGCCAGTTATAATAGGAGCATTAGTTGGAGCTGGGATTTTGCTCCTTCTCGTTCTCATAGTCGTTATTTTGTGTTCAAGAAAGAAAAAGAAAGCACACCCTCCCATTCATTACTTTAATCAACCGAGAGCAGCTCCAAATCAGTATGGATACAATAACGGTGAGCACGTTCTAAATATACCACCACCACCAGGAGCAGGTTGGGGAGTAGCAGTAGCACCCCAACCACCCCAGCGTGCTAGTAGTGACTTGAGCAACTCCAGTTTGTCTGGCTCCCATGGTCCAGCAATGCCACCCCCACACCCTACAGTGGCACTTGGATTCAACCAGAGTTCCTTCTCCTATGATGAGCTGTCAGCTGCAACTGATGGGTTTGCCCAACAGAACCTGTTGGGTCAAGGTGGCTTCGGTTTTGTACACAAAGGTGTCCTACCCAATGGAAAGGAAATAGCGGTAAAGAGCCTCAAATCCACGGGGTGCCAAGGAGACAGAGAATTCCAAGCTGAGGTTGATATTATTAGCCGTGTCCATCATCGTCATCTTGTGTCACTTGTTGGGTATAGCATCACAGAAAGCAAAAAGCTGCTGGTATATGAATTTGTGCCCAAGAAGACCCTTGAATTCCACCTTCATGGAAAGGGTCAACCTGTCATGGATTGGGGCACCAGGCTCAAAATTGCGATTGGATCAGCCAAAGGACTTGCTTATTTACATGAGGATTGTCACCCTCGTATCATTCACCGAGACATAAAGGGAGCAAACATTCTACTTCAAAACAACTTTGAGGCCAAAGTGGCAGATTTTGGATTGGCAAAGTTCAATCAAGACGCTAACACTCATGTTTCTACTCGCGTGATGGGAACATTCGGGTATTTGGCCCCTGAGTATGCATCAACTGGTAAGCTAACTGAAAAATCTGATGTCTTCTCGTTCGGTGTTATGCTTTTGGAGCTCGTGACAGGACGAGGCCCAGTGGACAACACCGGGGAATATGGAGAAGCTGATAGTCTGGTTGATTGGGCTAGACCACTGTTAACAAAGGCAACGGAAAATGGAACCTTGGATGGACTAGTTGATCCACGTTTAGAGGACAATTATGACAAGCAGGAGATGGTTCGTATGGTGGCTTGTGCTGCTGCTAGCGTTAGGCATTCAGCAAGGAGGCGCCCAAGAATGAGCCAGGTTGTACGAGTACTGGAGGGTGATGTCTCAGTAGATATCCTAAGTAAACATGACGAAGTGAAACCTGGGCAAAGTGCGCAATTGAGCGGCACAAGCAGCGAGTATGAGGCTGACATGGCAAGGTTCAGGAAACTAGCATTGGATAGTGGCATGGGAAGCAGTGAGTACGGTGGAACGAGTGAGTATGGCCTCAACCCTTCAACCTCAAGCAGTGATCGAGCAACTACTGAATATGGCAAGAGGACAGGAACAGGAAGCAGAATGCACACTCCTTGA 1929 0.492 MASNSPTASPPDSSSPQSPPPPSSAPAPSQDNSSSPPPSSSPPPPSSPPPSSPPPPSAPPPVPGDQNSSPPPPSSSPSPPPPVAGDQNSLPPPSGSSSSSPPPPPPPEKKSGSHPPPPPSSQAFSPPPTPHHRLSPPTKSSSSSLANASPDSGSHSNLPVIIGALVGAGILLLLVLIVVILCSRKKKKAHPPIHYFNQPRAAPNQYGYNNGEHVLNIPPPPGAGWGVAVAPQPPQRASSDLSNSSLSGSHGPAMPPPHPTVALGFNQSSFSYDELSAATDGFAQQNLLGQGGFGFVHKGVLPNGKEIAVKSLKSTGCQGDREFQAEVDIISRVHHRHLVSLVGYSITESKKLLVYEFVPKKTLEFHLHGKGQPVMDWGTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILLQNNFEAKVADFGLAKFNQDANTHVSTRVMGTFGYLAPEYASTGKLTEKSDVFSFGVMLLELVTGRGPVDNTGEYGEADSLVDWARPLLTKATENGTLDGLVDPRLEDNYDKQEMVRMVACAAASVRHSARRRPRMSQVVRVLEGDVSVDILSKHDEVKPGQSAQLSGTSSEYEADMARFRKLALDSGMGSSEYGGTSEYGLNPSTSSSDRATTEYGKRTGTGSRMHTP* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1759 642 Pfam Protein tyrosine and serine/threonine kinase 285 485 IPR001245 GO:0004672|GO:0006468
Apr5g1759 642 MobiDBLite consensus disorder prediction 604 642 - -
Apr5g1759 642 MobiDBLite consensus disorder prediction 135 154 - -
Apr5g1759 642 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Apr5g1759 642 SMART serkin_6 282 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1759 642 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 11 602 - -
Apr5g1759 642 Gene3D Phosphorylase Kinase; domain 1 258 357 - -
Apr5g1759 642 MobiDBLite consensus disorder prediction 12 88 - -
Apr5g1759 642 SUPERFAMILY Protein kinase-like (PK-like) 261 556 IPR011009 -
Apr5g1759 642 Gene3D Transferase(Phosphotransferase) domain 1 358 571 - -
Apr5g1759 642 MobiDBLite consensus disorder prediction 95 134 - -
Apr5g1759 642 MobiDBLite consensus disorder prediction 1 154 - -
Apr5g1759 642 MobiDBLite consensus disorder prediction 229 258 - -
Apr5g1759 642 MobiDBLite consensus disorder prediction 235 250 - -
Apr5g1759 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Apr5g1759 642 ProSiteProfiles Protein kinase domain profile. 282 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1759 642 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 11 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1759 Apr-Chr5 21015958 21019118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1759 110 628 Trihelix Transcription Factor Family AT1G70460 48.968 4.04e-153 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Apr5g1759 PK_Tyr_Ser-Thr 5.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1759 - - gmx:100806299 741.495