Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1729 ATGCCTCTGGGAATGGATTTTTCTCCGCCATTTACGATGTTAGAAGAGAAAGACAGCGCATTTGTGGTGGAAGATGAGAAATCAGAAGATTTGAATGATCTAAAACCAGTGAGAAAGGGAAAGCCTCCGCGGCACGTTTCGAGTTTGAGACACAGTATTAGCACCACCGGGTTGATGCTGGCTGAAGCAGAGTTGAGTTTGGATTTGGGGGTTGCTGGGAGCAAGTCGTCGTCTGAAGAAAAGACAGAGCTTCTACCCATGTTTCGGTCAGGAAGTTGTGCTGAAAGAGGACCTAAACAATATATGGAAGACGAACACATATGTATAGATAATCTTATTCAGCATATAGGTCCTGCTTCAAATATTCCTTTGCCTGGAGCTTTTTACGGGGTGTTTGATGGCCATGGAGGTACAGACGCAGCTTTGTTTATAAGAAATAACATCCTTAGATTCATAGTGGAGGACTCCCAGTTTCCAACTTGCATAAGGAAGGCAATTACAAGTGCGTTTCTGAAAGCTGATTATGCATTTGCAGATTCTAGTTCGCTTGATATCTCCTCTGGAACCACTGCTTTAACTGCTATTGTATTTGGAAGGAGCATGATAGTTGCCAATGCTGGTGATTGTCGAGCTGTACTTGGGAGGCGAGGTAGAGCAATTGAGATGTCAAAAGACCAAAAACCGAATTGCGATTCGGAAAAGCTAAGGATAGAGAAACTTGGGGGAGTGGTGTATGATGGATACTTGAATGGGCAGTTATCTGTTTCCCGTGCCTTGGGAGACTGGCACATGAAGGGTCCAAAGGGTTCTGCCTGCCCTTTGAGTGCAGAACCAGAGCTGCAGGAAATCAACCTCACTGAGGATGATGAGTTCTTGATTATGGGCTGCGATGGCCTGTGGGATGTCATGAGTAACCAATGTGCTGTGACCATGGCAAGAAAAGAATTGATGATACATAATGATCCTCAAAGGTGTTCAAGAGAGCTTGTTAGAGAGGCTCTTAAGCGTAATTCGTGTGATAATTTAACAGTTATAGTGGTGTGTTTCTCCTCAGATCCTCCTCCTAGGATAGAGATGCCTTCTTCTCGAGTCAGGAGGAGTATATCAGCAGAAGGCCTCAATTTACTTAAGGGTGTATTGGACTGTTAG 1149 0.4439 MPLGMDFSPPFTMLEEKDSAFVVEDEKSEDLNDLKPVRKGKPPRHVSSLRHSISTTGLMLAEAELSLDLGVAGSKSSSEEKTELLPMFRSGSCAERGPKQYMEDEHICIDNLIQHIGPASNIPLPGAFYGVFDGHGGTDAALFIRNNILRFIVEDSQFPTCIRKAITSAFLKADYAFADSSSLDISSGTTALTAIVFGRSMIVANAGDCRAVLGRRGRAIEMSKDQKPNCDSEKLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSAEPELQEINLTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVVCFSSDPPPRIEMPSSRVRRSISAEGLNLLKGVLDC* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1729 382 PANTHER PROTEIN PHOSPHATASE 2C 1 371 IPR015655 GO:0004722|GO:0006470
Apr5g1729 382 MobiDBLite consensus disorder prediction 24 40 - -
Apr5g1729 382 Pfam Protein phosphatase 2C 90 341 IPR001932 -
Apr5g1729 382 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 371 - -
Apr5g1729 382 ProSiteProfiles PPM-type phosphatase domain profile. 89 349 IPR001932 -
Apr5g1729 382 SUPERFAMILY PP2C-like 84 350 IPR036457 -
Apr5g1729 382 CDD PP2Cc 88 349 IPR001932 -
Apr5g1729 382 SMART PP2C_SIG_2 104 349 IPR001932 -
Apr5g1729 382 SMART PP2C_4 79 347 IPR001932 -
Apr5g1729 382 Gene3D - 70 352 IPR036457 -
Apr5g1729 382 MobiDBLite consensus disorder prediction 24 48 - -
Apr5g1729 382 ProSitePatterns PPM-type phosphatase domain signature. 128 136 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1729 Apr-Chr5 20786972 20790034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1729 3 381 PP2C-type Phosphatase Gene Family AT2G33700 72.135 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1729 K14803 - gmx:100778015 682.945