Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1723 ATGGAAGCAGAACATGGTGAGACCTCAAATGGAATCGGAGGGTTGTACGTGAAAGTGATGACCGATGACCAAATGGAACTTCTGAGGCAACAGATATCTGTCTACGCCACCATCTGTGAACAGCTTGTTGAGATGCACAAGGCCGTAACTACTCAACAGGACCTCGCAGGGCTGAGGCTGGGTAATTTGTACTGTGATCCGTTGATGGCATGCTCTGGACACAAGATAACTGCTAGGCAGCGTTGGACTCCAACGCCTCTGCAGCTTCAAATACTTGAGCGAATTTTTGATGAAGGAAATGGCACTCCAAGCAAACAGAAGATCAAAGAGATAACCCTTGAGCTGGGTCAACATGGCCAAATATCAGAGACAAATGTTTATAACTGGTTCCAGAACAGAAGAGCTCGTTCAAAGCGGAAGCAACTTGCACCAACTCCAAACAATGTAGAACCAGAAGCAGAGACAGAAGTTGAGTCTCCAAAAGAGAAAAAAACACGCGCAGAAAGCGTTCAAGTTCAACCCTATGAGAATTCATCACCTCCTAGGGTCAAAGATATGTACATCCATAGCCCTGACTTAGGATTTGACCAACTGATGGGCAAAATAGAAGTTGCAAGCTGTTACAGTTCTTATTTTCTTTGA 642 0.4486 MEAEHGETSNGIGGLYVKVMTDDQMELLRQQISVYATICEQLVEMHKAVTTQQDLAGLRLGNLYCDPLMACSGHKITARQRWTPTPLQLQILERIFDEGNGTPSKQKIKEITLELGQHGQISETNVYNWFQNRRARSKRKQLAPTPNNVEPEAETEVESPKEKKTRAESVQVQPYENSSPPRVKDMYIHSPDLGFDQLMGKIEVASCYSSYFL* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1723 213 MobiDBLite consensus disorder prediction 137 183 - -
Apr5g1723 213 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 213 IPR044559 GO:0003700
Apr5g1723 213 MobiDBLite consensus disorder prediction 154 169 - -
Apr5g1723 213 ProSiteProfiles 'Homeobox' domain profile. 75 140 IPR001356 GO:0003677
Apr5g1723 213 SMART HOX_1 77 144 IPR001356 GO:0003677
Apr5g1723 213 CDD homeodomain 79 141 IPR001356 GO:0003677
Apr5g1723 213 SUPERFAMILY Homeodomain-like 78 141 IPR009057 -
Apr5g1723 213 Gene3D - 80 143 - -
Apr5g1723 213 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 1 213 - -
Apr5g1723 213 Pfam Homeodomain 79 139 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1723 Apr-Chr5 20746842 20748843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1723 15 211 Wox Gene Family AT4G35550 56.195 2.16e-76 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Apr5g1723 Homeodomain 2.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1723 - - gmx:100820530 382.489