Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1718 ATGAGCTGTTTTTCTTGCTTTGTTTCTCGCCGGAAAGATGTGCGGAGGGTCGAAGTTGATAATGGAACTCGATCCGCTACTTCTTCGGAATCCTCGGAGGCGAAGGGGAAGAGTGTGAGCAGTAGCAAAAGCAATAAGGCTGCGGCTAGTTTTGGTTTTCGTGAGCTTGCAGCGGCAACGAGGGGTTTCAAGGAAGTGAATTTGATTGGGGAAGGTGGTTTTGGAAGGGTTTACAAGGGTCGTCTTTCAACAGGCGAGCTTGTTGCTGTAAAACAATTAAGTCACGATGGTCGCCAAGGTTTTCAGGAATTTGTGACGGAGGTTCTTATGTTGAGCCTGCTTCACCATTCCAATCTTGTTAAGTTAATTGGCTACTGCACTGATGGAGATCAAAGGCTTTTGGTTTACGAATACATGCCTATGGGTTCCTTGGAAGATCATCTTTTTGATCCTAATCAAGACAAAGAACCCCTAAGTTGGAGTGTTCGAATGAAGATCGCTGTTGGAGCTGCCCGTGGCCTCGAGTATCTCCACTGTAAAGCAGATCCGCCTGTTATCTATAGAGACTTGAAATCTGCAAACATCTTATTAGATGATGATTTCAGTCCAAAGCTGTCAGATTTTGGGCTTGCTAAACTTGGACCTGTAGGAGACAATACACATGTTTCGACCAGAGTGATGGGAACATATGGTTACTGTGCGCCGGAGTATGCGATGAGTGGCAAATTAACTCTTAAATCTGATATCTATAGCTTTGGTGTGGTTTTGTTGGAGTTGATCACTGGACGGAGGGCAATAGATACTAGTAGAAGACCTGGAGAGCAAAACCTAGTTTCATGGTCTCGCCCATTTTTCAGTGACCGGAGAATGTTTGTACATATGGTCGACCCTCTTTTACAAGGAAACTTTCCCTTGCGCTGTTTGCATCAGGCAATTGCTATAACTGCTATGTGTCTCCAGGAGCAACCAAAATTCCGTCCACTTATTGGTGATATTGTTGTTGCACTGGAATACCTAGCTTCTCAGAGTATCCCTGAAGTCCATAAACAAGTTGGCCGCAGCCCACCACTGCAACCACCTTCTGAAATGGACAGAAATTAA 1101 0.4487 MSCFSCFVSRRKDVRRVEVDNGTRSATSSESSEAKGKSVSSSKSNKAAASFGFRELAAATRGFKEVNLIGEGGFGRVYKGRLSTGELVAVKQLSHDGRQGFQEFVTEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDPNQDKEPLSWSVRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDDDFSPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDTSRRPGEQNLVSWSRPFFSDRRMFVHMVDPLLQGNFPLRCLHQAIAITAMCLQEQPKFRPLIGDIVVALEYLASQSIPEVHKQVGRSPPLQPPSEMDRN* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1718 366 MobiDBLite consensus disorder prediction 21 39 - -
Apr5g1718 366 MobiDBLite consensus disorder prediction 19 39 - -
Apr5g1718 366 MobiDBLite consensus disorder prediction 347 366 - -
Apr5g1718 366 ProSitePatterns Protein kinases ATP-binding region signature. 69 91 IPR017441 GO:0005524
Apr5g1718 366 CDD STKc_IRAK 69 337 - -
Apr5g1718 366 PANTHER OS07G0668900 PROTEIN 25 353 - -
Apr5g1718 366 Gene3D Transferase(Phosphotransferase) domain 1 139 353 - -
Apr5g1718 366 ProSiteProfiles Protein kinase domain profile. 63 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1718 366 PIRSF ILK 5 351 - -
Apr5g1718 366 Pfam Protein kinase domain 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1718 366 PANTHER OS07G0668900 PROTEIN 25 353 - -
Apr5g1718 366 SMART serkin_6 63 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1718 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Apr5g1718 366 SUPERFAMILY Protein kinase-like (PK-like) 44 337 IPR011009 -
Apr5g1718 366 Gene3D Phosphorylase Kinase; domain 1 22 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1718 Apr-Chr5 20710729 20714824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1718 1 341 Glycoside Hydrolase AT3G07070 60.056 1.66e-149 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Apr5g1718 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1718 - - gmx:100796595 587.8