Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1702 ATGGGCTGCAACAGCTCAAGACTTGAACGGCTTCCGGCGGTGGCTTTATGCCGTGAACGTTGCAAATTCCTCAACGAAGCACTTCGTCAAAGCTATGCCCTCGCCGATGCCCACGTGGCACACATGGAGTCTCTCAAAACGCTTGGTCCCGCACTTCTCTGTTTCTTCGCTCATTTCGAAGATTCTGGAGAAACTAATTCCCCAATTAACGAAACTAAACCCTCCCTCCCTAAATCGCCACCTCCTCGTTCCCCATCTTCCTCTAGTTCAGACTCAGATGCGCACGTCCTTTTGCATTCTGAATTAGAAGCCGAAGACGTAGATAAAGGATTCCAAGTGTTTCCGTCTTTCTCCGAGTTCTCACTCGCCGACCTCAGAGCCGCCACCAACGGCTTCAGCTCCGACCACATCGTCTCCGAGAGCGGCGAGAAAGCCCCCAATGTGGTCTTCAAAGGTCGCCTCCAAAACCATAACCGTCGTTGGATTGCCGTTAAGAGGTTTTCTAAGTTGGCCTGGCCCGATCCCAAGCAGTTCGCTGACGAAGCTTGGGGTGTTGGCAATTTGAGGCACCACAGGCTTGCTAATTTGATTGGTTATTGCTGTGATGGGGATGAGAGGATTCTCGTTGCAGAGTACATGCCCAACGACACTCTCGCCAAACATCTTTTCCACTGGGAAAATCAGACAATTGGATGGAACATGCGGTTAAGAGTTGCCCTATTCATCACTGAAGCATTAGATTATTGTAGTAACAAAGGTTATCCATTATACCATGACTTGAATGCTTACAGAGTTTTATTTGATGAGAATGGCGACCCCCGGCTTTCATGTTTTGGTCTGATTAAGAACAGCAGGGACGGGAAAAGTTATAGCACAAATCTTGCCTATACACCTCCTGAGTATCTGAGAAATGGGAGGGTGACTCCAGAAAGTGTTATCTACAGCTTTGGGACTGTGTTATTGGATCTTCTAAGTGGAAAGCATATCCCTCCAAATCATGCTCTTGACATGATAAGGGGTAAAAACATTCGACTCCTTATGGATTCACATTTGGAGGGAAACTTTTCAACGGAAGAGGCAACTGTGGTTTTTGATCTTGCCTCACAATGTTTGCAGTATGAACCAAGGGAGCGGCCCAAGACCCAGGACCTTGTTACGACTCTTTCTCCACTACAAATTAAACCAGATGTTCCATCATATATTATGCTTGGAATTCCAAAGCGTGAGGAAGCACCTCCTACCCCACAGCATCCTCTGTCTCCATTGGGTGATGCTTGTTCTCGCATGGATCTTACTGCTATTCATCAGATTTTATTGATGACAAACTATAGAGATGACGAAGGGAGTAACGAGTTATCTTTTCAAGAGTGGACCCAGCAAACGAGGGATATGCTGGAGGCAAGAAAGCATGGTGACTTGGCATTTCGTGACAAGAATTTTAGAACCTCAATTGAATGTTACTCCCAGTTCATCGATGTTGGAACCATGGTTTCCCCAACTGTCTATGCACGAAGAAGTCTTTGCTATCTCTTATGCGATCAACCAGATGCTGCTCTCAGAGACGCCATGCAAGCTCAGTGTGTCTATCCTGACTGGCCCACGGCATTTTACATGCAAGCGGTTGCTCTTTCCAAATTAAACATGAATAAGGATGCAGCTGACATGCTGAGTGAGGCCGCTGCTCTCGAGGAGAAAATGCAACGAGGAAAATAA 1713 0.467 MGCNSSRLERLPAVALCRERCKFLNEALRQSYALADAHVAHMESLKTLGPALLCFFAHFEDSGETNSPINETKPSLPKSPPPRSPSSSSSDSDAHVLLHSELEAEDVDKGFQVFPSFSEFSLADLRAATNGFSSDHIVSESGEKAPNVVFKGRLQNHNRRWIAVKRFSKLAWPDPKQFADEAWGVGNLRHHRLANLIGYCCDGDERILVAEYMPNDTLAKHLFHWENQTIGWNMRLRVALFITEALDYCSNKGYPLYHDLNAYRVLFDENGDPRLSCFGLIKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPNHALDMIRGKNIRLLMDSHLEGNFSTEEATVVFDLASQCLQYEPRERPKTQDLVTTLSPLQIKPDVPSYIMLGIPKREEAPPTPQHPLSPLGDACSRMDLTAIHQILLMTNYRDDEGSNELSFQEWTQQTRDMLEARKHGDLAFRDKNFRTSIECYSQFIDVGTMVSPTVYARRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYMQAVALSKLNMNKDAADMLSEAAALEEKMQRGK* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1702 570 Coils Coil 545 570 - -
Apr5g1702 570 Pfam Protein tyrosine and serine/threonine kinase 148 388 IPR001245 GO:0004672|GO:0006468
Apr5g1702 570 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 4 PROTEIN-RELATED 110 569 - -
Apr5g1702 570 MobiDBLite consensus disorder prediction 65 94 - -
Apr5g1702 570 Gene3D Phosphorylase Kinase; domain 1 108 212 - -
Apr5g1702 570 Gene3D Tetratricopeptide repeat domain 463 570 IPR011990 GO:0005515
Apr5g1702 570 SUPERFAMILY Protein kinase-like (PK-like) 111 399 IPR011009 -
Apr5g1702 570 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
Apr5g1702 570 ProSiteProfiles Protein kinase domain profile. 135 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1702 570 SUPERFAMILY TPR-like 467 564 IPR011990 GO:0005515
Apr5g1702 570 Gene3D Transferase(Phosphotransferase) domain 1 214 401 - -
Apr5g1702 570 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 110 569 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1702 Apr-Chr5 20550658 20555324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1702 120 400 Glycoside Hydrolase AT3G07070 33.974 3.61e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Apr5g1702 PK_Tyr_Ser-Thr 2.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1702 K14500 - vvi:100245381 837.41