Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1697 ATGCCGTTCGAGTTGGCGGGAGGAGCCGCTGTCGGTGCCCTGTTCCTATGCGTTGTTATTTCTCTTTTTCACATTACTTGGGCTGAAGACCCCTACAGGTTCTTCAACTGGAATGTTACTTATGGGGACATTTACCCGCTTGGGGTTCGCCAAAGGGGGATATTAATTAACGGGCAATTCCCAGGTCCAGACATTCATTCTGTTACCAACGACAATCTCATCATCAACGTTTTCAACAGCTTGGATGAGCCCTTTCTCCTCTCCTGGAACGGGATCCAGCAGAGAAGGAACTCATTCGAAGATGGTGTTTTAGGAACAACCTGCCCCATCCCACCGGGGAAGAACTTCACTTATATGCTTCAAGTGAAGGATCAGATTGGGAGCTTTTACTACTTCCCATCACTTGCATTCCACAAAGCCGCTGGTGGTTTTGGAGGCATTAGGATCCTTAGCAGGCCACGAATTCCAGTTCCCTTCCCTGATCCCGCTGGTGATTACACTGTTCTTATTGGAGATTGGTACAAATCCAACCACACGACATTGAAAGCCCATCTTGACAGGGGCAAGAAGCTGCCTTTTCCGGATGGAGTGCTAATCAATGGTCGCGGTCCTAATGGAGTATCTTTCAACGTTGAACAAGGGAAGACTTACAGGCTTAGAATATCAAATGTGGGGCTGCAACATTCCCTTAACTTTCGCATCCAGAACCACAAAATGAAGTTGGTAGAAGTGGAAGGAACACACACCCTTCAAACTACGTACTCCTCTATTGATGTTCATGTAGGCCAATCTTATTCAGTGCTGGTAATTGCCGATCAACCTGCTCAGGACTATTACATTGTGGTTTCCACACGATTCTCCTATAAAATCCTAACTACCACCGGAGTACTTCGCTATAGCAACTCAGCAGGCCCAGTATCAGGCCCGCCCCCTGGTGGACCCACGACCCAAATTGATTGGTCTTTGAATCAGGCCCGCTCAATTAGGACTAACCTTACAGCAAGTGGACCGAGGCCAAACCCGCAAGGATCTTACCATTACGGTCTCATAAACACGACGAAGACCATCATATTGGGCAGTTCAGCTGGTCAAGTAAATGGCAAGCAAAGATACGCAATAAACAGCGTTTCTTATGTTGCCCCGGACACGCCTCTTAAGCTTGCCGATTACTTCAAAATCTCAGGTGTTTTCCGCGCTGGAAGCATATCTGACAGACCCACTGGTGGTGGCATTTACCTCGATACTTCTGTGTTGCAAGCAGACTACAGATCTTTCGTCGAGATTGTCTTCCAAAACAACGAGAACATCGTTCAAAGCTATCATCTTGATGGCTACTCTTTCTTTGTTGTTGGTATGGATGGAGGACAATGGACAACTGCTAGCAGAAACCAGTACAATCTCCGAGATGCAGTTGCACGATGCACCACGCAGGTTTATCCCTATTCATGGACTGCTATTTATGTTGCCCTTGACAATGTGGGAATGTGGAACTTGAGGTCTGAGTTTTGGGCACGACAATACCTTGGCCAACAGTTTTATTTGCGGGTTTACACAACATCAACCTCAATCAGAGACGAGTTTCCTGTTCCAAAGAATGCAATTCTATGTGGTAGGGCAAGTGGGAGACACACGCGACCCCTTTGA 1644 0.4708 MPFELAGGAAVGALFLCVVISLFHITWAEDPYRFFNWNVTYGDIYPLGVRQRGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQQRRNSFEDGVLGTTCPIPPGKNFTYMLQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTTLKAHLDRGKKLPFPDGVLINGRGPNGVSFNVEQGKTYRLRISNVGLQHSLNFRIQNHKMKLVEVEGTHTLQTTYSSIDVHVGQSYSVLVIADQPAQDYYIVVSTRFSYKILTTTGVLRYSNSAGPVSGPPPGGPTTQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIILGSSAGQVNGKQRYAINSVSYVAPDTPLKLADYFKISGVFRAGSISDRPTGGGIYLDTSVLQADYRSFVEIVFQNNENIVQSYHLDGYSFFVVGMDGGQWTTASRNQYNLRDAVARCTTQVYPYSWTAIYVALDNVGMWNLRSEFWARQYLGQQFYLRVYTTSTSIRDEFPVPKNAILCGRASGRHTRPL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1697 547 Pfam Multicopper oxidase 383 519 IPR011706 GO:0005507|GO:0016491
Apr5g1697 547 Gene3D - 32 153 IPR008972 -
Apr5g1697 547 PANTHER MULTI-COPPER OXIDASE 11 540 IPR045087 -
Apr5g1697 547 Pfam Multicopper oxidase 165 301 IPR001117 -
Apr5g1697 547 SUPERFAMILY Cupredoxins 349 538 IPR008972 -
Apr5g1697 547 SUPERFAMILY Cupredoxins 159 339 IPR008972 -
Apr5g1697 547 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 11 540 - -
Apr5g1697 547 Pfam Multicopper oxidase 39 152 IPR011707 GO:0005507
Apr5g1697 547 SUPERFAMILY Cupredoxins 26 179 IPR008972 -
Apr5g1697 547 Gene3D - 348 543 IPR008972 -
Apr5g1697 547 Gene3D - 163 338 IPR008972 -
Apr5g1697 547 CDD CuRO_3_AAO_like_1 381 501 IPR034275 GO:0005507
Apr5g1697 547 CDD CuRO_1_AAO_like_1 34 149 IPR034273 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1697 Apr-Chr5 20520681 20527717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1697 - - gmx:100776222 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0685 9 11266774 11271801 Apr5g1697 5 20520681 20527717 PCT