Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1693 ATGGGAGATACAGAGAGTTGCAGCAGCAGAGTTTTCGATTCTGGGTGGAATCAAAGCCCGAAGCAGAGACAGAAGGTTGGAGTTTACAACGAGGTTCTTTGTAGACTTAGGGAATTGAATGTCCCAGAGGCTCTGGCTCCTGGTTTTGAAGATGAGCTTTGGGCGCACTTCTATCGCCTTCCCGCTAGGTATGCGTTGGACATGAATGTGGAGAGGGTCCAAGATGTTCTTATGCATAAAAGGTTACTGGACATCGCACGAAAACCTGCTACAGCAGCAACCGCACCTGCTGTCGAAGTTCGTCTTGTACAGGTTCGTTATACTTCTGGTGTGCAAAGTAAAGTCAGTCCTCAAGATTCTGGCATTCCAGGCAACATGAGCTTCCATCCTCCCCCGGCCTTCGGTTCATCAGTTAACATGGAACTTGCTATTGGTGAGAGCCAGTTACAGGTCAGAGATAGGGACAACTATGTTAATTTTTATGCACATTATGCCAGGTCTATGCATGAAATCACAATTTCCACACATGACAAGCCAAAACTTTTCTGTCAGTTGACCTCTTTACTGTCTGAGACTGAGTTAGACATTCAAGAAGCTCATGCTTTTTCAACATTAGATGGCTATTCATTGGATGTTTTTGTTGTTGGCGGTTGGGCAGTTGAGGAGACAGAGAAGTTAAAACATGAACTGGCAAAGAAAATTCAGAAACTCCAGGAGCAACTTCTACTGAAAGAAAATATGAGTCTACCTACAGCAAAGCAAGAGCAAACCAGGATGAACTTCATCTCTAAAAATGTAAATTTGCCTACTTGTGGAAATGATATCTGCAGAATTGATGCAAGATGTTTGAGATATGAAAAGAAAATTGCATCTGGACCTTTCAGTGATTTGTATAAAGGTACGTTCTGTAATCAAGATGTAGTGATCAAAGTCCTTAAGAATGAGAATTTGAACGAAAATATACAAAAGGAGTTTGCTCAGGAAGCTTATATCCTAAGTAAAATTCAGCACAAGAATATTGTCAAATTTGTAGGCGCTTGTACAAAACCCCCTAACTTTTACCTTGTCACAGAATACATGTCTGGCGGAAGTATGTACGACTTTCTGCATAAACAGAAGAATGTCCTTGCTCTTCCATCTTTACTCAAAGTAGCCACTGATATTTCCAAAGGAATGAAATATTTGCATCAGCATGATATCATACATCGGGACCTTAAAGCGGCTAATCTTTTGATAGATAAGAGTGGGGTTGTAAAGGTTGCTGATTTTGGTGTAGCTAGAGTGCACGATCAGTCTGGTATAATGACTGCAGAAACTGGAACTTATCGGTGGATGGCTCCAGAGATTCCATATGAGCATTTGTCCCCATTGCAAGCAGCACTCGGAGTGGTCCAAAAGGGTTTAAGGCCTAAAATTCCAAGGCATACTCATCCAAAGTTAGTGGAATTGCTTAACTGGTGCTGGCACCAAGATCCCTCCACAAGACCCAATTTCTCCGAAATTCTGGAATTTCTTCTGTATGTGACCAAAATGGTTACAGGAGAATGTGAAGGCAAGGGAAATGCATGGGAATGA 1575 0.419 MGDTESCSSRVFDSGWNQSPKQRQKVGVYNEVLCRLRELNVPEALAPGFEDELWAHFYRLPARYALDMNVERVQDVLMHKRLLDIARKPATAATAPAVEVRLVQVRYTSGVQSKVSPQDSGIPGNMSFHPPPAFGSSVNMELAIGESQLQVRDRDNYVNFYAHYARSMHEITISTHDKPKLFCQLTSLLSETELDIQEAHAFSTLDGYSLDVFVVGGWAVEETEKLKHELAKKIQKLQEQLLLKENMSLPTAKQEQTRMNFISKNVNLPTCGNDICRIDARCLRYEKKIASGPFSDLYKGTFCNQDVVIKVLKNENLNENIQKEFAQEAYILSKIQHKNIVKFVGACTKPPNFYLVTEYMSGGSMYDFLHKQKNVLALPSLLKVATDISKGMKYLHQHDIIHRDLKAANLLIDKSGVVKVADFGVARVHDQSGIMTAETGTYRWMAPEIPYEHLSPLQAALGVVQKGLRPKIPRHTHPKLVELLNWCWHQDPSTRPNFSEILEFLLYVTKMVTGECEGKGNAWE* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1693 524 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 9 449 - -
Apr5g1693 524 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 449 509 - -
Apr5g1693 524 ProSiteProfiles ACT domain profile. 170 245 IPR002912 -
Apr5g1693 524 ProSiteProfiles Protein kinase domain profile. 283 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1693 524 CDD STKc_MAP3K-like 289 505 - -
Apr5g1693 524 SMART serkin_6 283 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1693 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
Apr5g1693 524 SUPERFAMILY Protein kinase-like (PK-like) 268 505 IPR011009 -
Apr5g1693 524 SUPERFAMILY ACT-like 167 241 IPR045865 -
Apr5g1693 524 Gene3D Transferase(Phosphotransferase) domain 1 360 453 - -
Apr5g1693 524 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 449 509 - -
Apr5g1693 524 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 449 - -
Apr5g1693 524 Gene3D Transferase(Phosphotransferase) domain 1 454 517 - -
Apr5g1693 524 Gene3D Phosphorylase Kinase; domain 1 273 359 - -
Apr5g1693 524 Coils Coil 309 329 - -
Apr5g1693 524 Pfam Protein tyrosine and serine/threonine kinase 284 449 IPR001245 GO:0004672|GO:0006468
Apr5g1693 524 Coils Coil 220 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1693 Apr-Chr5 20472831 20481431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1693 5 505 MAP Kinase Kinase Kinase AT4G35780 52.886 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Apr5g1693 PK_Tyr_Ser-Thr 9.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1693 - - aprc:113864606 1028.85