Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1690 ATGGTCACAATGCCGCAGAAATCGAATCCCGTGGTCTACGTCCACGGGACCCTCGATCTGAGAATCGTCGAGGCTCGGTTCTTGCCGAACATGGACCTATTTTCGGAGCGCATTCGAAGGTTCTTCTCCGCTCTCAACACGTGCAGCTCTTCCATCACCCGCAAGAGGAGTAACCACCACTCCCGTCACCGACACCGCAAGATCATCACCAGCGACCCTTACGTCACCGTTTGCCTCGCCGGTGCCACCGTGGCACGCACCCGCGTCATCTCAAATTCCCAGAACCCCACCTGGAACGAGCGTTTCAAGATTCCCCTGGCGCACCCGGCCTCGCAGGTCGAGTTCCACGTCAAGGACAACGACATGTTCGGTGCTGACTTGATCGGAACAGCCACCGTCTCCGCCGAGAAGTTTCTAACCGGCGACGTCATCAGCGATTGGTTTCCGATCATAGGTTCGTTCGGGAAGCCGCCGAAGCCTGATTGCGCGGTTCGGCTGGAAATGAAATTCACGAGGTGCGAAGATAGTGATCTGTTCCGGCCCGGCATTGCGCCGGATCCGGATCGGTTCGTGGTTCGGGATTCGTATTTTCCGGTTCGGCATGGAGGATCGGTGAAGCTTTATCAGGACGCGCACGTGCCGGAAGCAATGTTGCCGGAGGTTGAGTTGGAGGATGGGGTGGTGTTTGAGCATGGAAAGTGCTGGGAAGATATTTGTCACGGAATTCTGGAAGCTCATCATTTGGTTTACATTGTGGGCTGGTCCATTTACCACAAGGTGAGGCTCGTTAGAGAGCCCACGAAGCCCTTACCCAGCGGTGGGAATTTGAATTTGGGGGAGTTGCTCAAGTACAAGTCACAAGAAGGTTTGCGAGTTTTACTGTTGGTTTGGGATGATAAGACTTCCCACAGCAAATTTTTCATTAACACGACTGGAGTAATGCAAACTCATGATGAAGAAACTCGAAAGTTTTTCAAGCATTCTTCAGTTAATTGTGTGCTGTCACCAAGATATGCCAGCAGTAAGCTTAGCATTTTCAAGCAGCAGGCATGCTTTATGCTATGGTTTAGTAGCTTTCCCCCGACTTCTTTAATTTTCCTACTTCAGGTTGTTGGGACTCTCTTTACGCATCATCAGAAATGTGTGATTGTGGATTCGCAAGCACACGGCAATAATCGGAAGATAACTGCATTTGTAGGTGGTTTAGATCTTTGTGACGGGCGGTATGATACACCTCAACATAGAATCTTCCGTGATCTTGACACTGTTTACCGGGACGATTACCATAATCCAACGTTTTGCGCGGGAACCAAGGGTCCTAGGCAACCATGGCATGATTTACATTGTAAAATTGAAGGCCCAGCTGCATATGATATACTCACTAATTTTGAGCAGCGCTGGAGAAAAGCCAGCAAATGGTCTGAGTTGGGTCAAAAATTCAAGAGAGTATCTCACTGGCACGATGATTCTTTGATCAAGTTAGAACGCATTTCTTGGATTCTTAGTCCTTCTGAATCAATTCCAAATGATGATCCTGAACTTTGGGTTTCAAAGGAAGAAGATCCTCAAAATTGGCATGTTCAGGTTTTTCGATCCATAGATTCTGGCTCTTTGAAAGGATTTCCCAAGGATGTATATCAAGTTGAGGCTCAGAACCTTGTTTGTGCCAAAAATTTGGTCGTAGACAAGAGTATCCAAACAGCATATATACATGCGATCAGATCTGCTAAACATTTTATTTATATCGAGAATCAATATTTTGTGGGATCATCCTTTGCTTGGCCATCTTACAAAGAAGCAGGTGCTGATAACCTAATTCCAATGGAGTTGGCATTGAAGATAGTCAGTAAGATCAGAGCCAAGGAGAGGTTTACAGTTTACATTGTCATCCCAATGTGGCCCGAAGGTGTCCCTTCTTCTGCCTCGGTGCAAGAGATTCTCTTTTGGCAGGGACAAACTATGCAAATGATGTATGAAATCATAGCCCGGGAATTGAAATCTATGCACCTTGAGGATAGTCATCCACTAGATTACCTCAATTTTTACTGTCTTGGGAATCGAGAGAAGTTGACAACTGAAGTTTCAAATTCAAGTTCACCTTCAGATAATGGCGAAACGGTTTCATCCTCACAAAAGTTCCGACGGTTTATGATTTATGTACACGCCAAGGGAATGATTGTGGATGATGAATATGTGATACTTGGATCTGCCAATATAAATCAACGATCTATGGCTGGATCAAGAGATACTGAGATAGCAATGGGTGCATATCAACCCCATCATACGTGGAGCAAGAAAAAAGGACATCCACACGGTCAGGTATATGGGTATAGAATGTCTTTGTGGGCAGAACACATGGATACCACACTTGCTTGCTTCAAGGAGCCTGAGAGTTTGGATTGTGTAAAGAGTGTGAATAAGATTGCTGAAGAAAACTGGAGGAAGTACACAGCGGAAGATTTTACTCCATTGCAAGGGCACCTTACGAAATATCCTGTGATCGTAAATGTAAATGGAAAGGTAAGATCCATACCTGGATATGAGCAATTCCCAGATGTCGGCGGCAAGGTGCTTGGCTCCCGGTCTACCCTTCCTGATGCTCTAACTACATAG 2613 0.4627 MVTMPQKSNPVVYVHGTLDLRIVEARFLPNMDLFSERIRRFFSALNTCSSSITRKRSNHHSRHRHRKIITSDPYVTVCLAGATVARTRVISNSQNPTWNERFKIPLAHPASQVEFHVKDNDMFGADLIGTATVSAEKFLTGDVISDWFPIIGSFGKPPKPDCAVRLEMKFTRCEDSDLFRPGIAPDPDRFVVRDSYFPVRHGGSVKLYQDAHVPEAMLPEVELEDGVVFEHGKCWEDICHGILEAHHLVYIVGWSIYHKVRLVREPTKPLPSGGNLNLGELLKYKSQEGLRVLLLVWDDKTSHSKFFINTTGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSIFKQQACFMLWFSSFPPTSLIFLLQVVGTLFTHHQKCVIVDSQAHGNNRKITAFVGGLDLCDGRYDTPQHRIFRDLDTVYRDDYHNPTFCAGTKGPRQPWHDLHCKIEGPAAYDILTNFEQRWRKASKWSELGQKFKRVSHWHDDSLIKLERISWILSPSESIPNDDPELWVSKEEDPQNWHVQVFRSIDSGSLKGFPKDVYQVEAQNLVCAKNLVVDKSIQTAYIHAIRSAKHFIYIENQYFVGSSFAWPSYKEAGADNLIPMELALKIVSKIRAKERFTVYIVIPMWPEGVPSSASVQEILFWQGQTMQMMYEIIARELKSMHLEDSHPLDYLNFYCLGNREKLTTEVSNSSSPSDNGETVSSSQKFRRFMIYVHAKGMIVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPHHTWSKKKGHPHGQVYGYRMSLWAEHMDTTLACFKEPESLDCVKSVNKIAEENWRKYTAEDFTPLQGHLTKYPVIVNVNGKVRSIPGYEQFPDVGGKVLGSRSTLPDALTT* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1690 870 Pfam Phospholipase D C terminal 792 860 IPR024632 -
Apr5g1690 870 SMART C2_3c 17 147 IPR000008 -
Apr5g1690 870 PIRSF PLD_plant 3 870 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Apr5g1690 870 CDD C2_plant_PLD 11 171 - -
Apr5g1690 870 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 716 743 IPR001736 GO:0003824
Apr5g1690 870 Gene3D C2 domain 13 178 IPR035892 -
Apr5g1690 870 Pfam Phospholipase D Active site motif 374 408 IPR001736 GO:0003824
Apr5g1690 870 Pfam PLD-like domain 570 752 IPR025202 -
Apr5g1690 870 Gene3D Endonuclease Chain A 539 765 - -
Apr5g1690 870 Gene3D Endonuclease Chain A 229 491 - -
Apr5g1690 870 PANTHER PHOSPHOLIPASE D 8 869 IPR015679 -
Apr5g1690 870 SMART pld_4 373 408 IPR001736 GO:0003824
Apr5g1690 870 SMART pld_4 716 743 IPR001736 GO:0003824
Apr5g1690 870 PANTHER PHOSPHOLIPASE D 8 869 - -
Apr5g1690 870 ProSiteProfiles C2 domain profile. 1 148 IPR000008 -
Apr5g1690 870 Pfam C2 domain 16 150 IPR000008 -
Apr5g1690 870 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 170 IPR035892 -
Apr5g1690 870 SUPERFAMILY Phospholipase D/nuclease 560 802 - -
Apr5g1690 870 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 373 408 IPR001736 GO:0003824
Apr5g1690 870 SUPERFAMILY Phospholipase D/nuclease 194 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1690 Apr-Chr5 20440023 20446277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1690 8 707 Phospholipase D Gene Family (Wang group) AT4G35790 63.547 0.0 946
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1690 K01115 - gmx:100795859 1549.64