Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1676 ATGGCCTCACTCTTCCCCACTTCTCCATCTCCTTCTTCACTTCGACAAACACCTTCAACCAACGCTAAATCCATTGAACATGTCTGGAACGACATTAAACTTTCCTCTCTCTCTAACTGCTCCTTAGACCTCAACCTCAACAATCCCACATCGCTTGCTGCTGATTCTTCTTTTCTTAAACGACATACTCCACCCACCTTTCTTTCCGCTCCTAACCCTTCCTTTGATGCTAATTGCGACCCCAATATCAACAAAATGGTTCAACGAGATATCTATGATAAACGACATAAACGCATGATCAAGAATCGAGAATCTGCAGCTTATAGAAAAGAGTTGGAAATTAAAATTGCCCGTTTAACGGAAGAGAATTCCAGACTAAGAAAACAACTGGAAGAGTTGCAGATTCGCGTGGCTATGCCTCCCAGAATGGGAACACTGTATAGAACCTCAACATCTCCATTTTGA 465 0.4237 MASLFPTSPSPSSLRQTPSTNAKSIEHVWNDIKLSSLSNCSLDLNLNNPTSLAADSSFLKRHTPPTFLSAPNPSFDANCDPNINKMVQRDIYDKRHKRMIKNRESAAYRKELEIKIARLTEENSRLRKQLEELQIRVAMPPRMGTLYRTSTSPF* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1676 154 Coils Coil 102 136 - -
Apr5g1676 154 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 8 70 IPR043452 GO:0003700|GO:0045893
Apr5g1676 154 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 88 154 IPR043452 GO:0003700|GO:0045893
Apr5g1676 154 SMART brlzneu 88 149 IPR004827 GO:0003700|GO:0006355
Apr5g1676 154 SUPERFAMILY Leucine zipper domain 94 135 IPR046347 GO:0003700|GO:0006355
Apr5g1676 154 MobiDBLite consensus disorder prediction 1 20 - -
Apr5g1676 154 CDD bZIP_plant_BZIP46 94 138 - -
Apr5g1676 154 PANTHER PROTEIN FD 8 70 - -
Apr5g1676 154 PANTHER PROTEIN FD 88 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1676 Apr-Chr5 20329233 20329984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1676 84 154 bZIP Transcription Factor Family AT3G56850 48.193 1.01e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1676 K14432 - aprc:113866309 296.589