Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1674 ATGAAAGACAATTCTGTTTTCTTGTTATTATTCTGCATTATCTTGCTGTTTCTAGGAGAAGGGAATGGAAGTAACGATGACACTAAACGGGGCGTTTATATCGTGTATATGGGAGCCGCGGCTTCAACAAATGTTTCACTTCGTAGTGACCATGCTTATGTTCTGAATTCAGTGCTAAGAAGGAATGAGAAGGCTTTAGTACGCACCTACAGACATGGTTTCTCGGGGTTCGCAGCGCGTTTATCAGAAGATGAGGCAAACTCAATTGCTCAGAAACCTGGTGTTGTGTCTGTCTTCCCCGACCCCATTCTGAAGCTCCACACAACACATTCCTGGGATTTCCTCAAGAACCAATTTCCAGTCAAAATTGACGACCCAAACACGGTCTCCAATTCTTCTTCCTCATCAGACATCGTCATTGGCGTCTTAGACACAGGTATATGGCCGGAGGCGGCAAGTTTTGCCGACGAGGGTATGGGTCCTGTTCCTTCCCGTTGGAAAGGCACCTGCATGAAATCACACGACTTCAATTCATCTAACTGTAACAGGAAGTTAATCGGAGCAAGGTATTACCCAGACCCTGATAAGGACGAAGAGTATGACACACCAAGGGACATAGAAGGGCATGGGACCCACGTGGCGTCGACGGCGGCGGGAGTGGCCGTGAGTGGTGCGTCTTACTATGGTGTTGCGGCGGGGACCGCCAAGGGTGGGTTACCGGAATCAAGATTGGCGATTTACAAAGTGTGCTTTAAATATGATTGCCCTGGCTCCGCAGTTCTTGCGGCGTTTGACGATGCCATTGCGGATGGAGTGGACGTGTTATCGGTCTCGCTGGGTCCCATCTATGTGTTTAGGTCCGAGTTGAAATCCGACCCAATTGCCATCGGAGCCTTCCATGCCGTGGAGCGTGGCATCGTCGTGGTTTGCTCCGCCGGGAACGATGGACCAAGTTCAAACACCGTTGTCAACGATGCGCCTTGGATTTTAACCGTCGGAGCCACCACCATTGACCGGGATTTTCAGTCCAACGTTGTCTTGGGTGGTAACAAAGTGATCAAGGGCGAAGGCATAAATTTGTCCCCCCTCTCAAACTCTCCCAAGTATCCATTGATATATAGTGAGTCGGCCAAGGCAAGTGGCGCCACCTTAGATGAAGCAAGGCAATGCTTCCCAGATTCCTTAGATGAACATAAAGTGAAAGGGAAGATTGTAATTTGCGATGGCAGAGATCATTCATATGATACTGGTTTAAAAGTTAAAGCTGTGAAACAAGCAGGAGGATTTGGTTTGGCTCATAGTACTGATCCAAAAGGAGCAGAAGCATCAATTTATGGGGGCTACCCTGCAACAGAGATAAGTTACAAAGATGCTGCCACAATGCTTCAGTATGTCAATTCAACCAGCAATCCAGTGGCAACAATTCTACCAACAGTTACAGTGATTGATTATAAGCCTGCACCCATGGTGGCATCCTTTTCATCAAGAGGACCTTCTACATTTTCACCGAATATTATCAAGCCTGATATTGCTGCGCCAGGGGTTAACATTCTTGCAGCATGGATTGGTGGCAATGGCACACAAGACGTTCCAAAAGGAAGAAAGCCTTCCCATTTCAATATCCTCTCAGGGACTTCAATGTCATGCCCACACGTTGCAGGGATTGCAGGCAGCATCAAATCTCAGAACCCCACTTGGAGTGCCTCTGCAATCAGATCAGCAATCATGACCTCAGCAACTCAAAGCAACAGCTTGAATGCTCCTATAACAACGGATTCTGGGTCAGTAGTCACACCCTATGACTATGGATCAGGGCAAGTAACAATATATCGACCATTGCAACCTGGGCTAGTTTATGAAACCAGCACCATGGACTACTTGAACTACTTGTGTTACGTTGGACTTAATACAACCATGGTCAAGATTATCTCCAGAACTGTCCCTAAAAGCTTCAATTGCCCCAAGGATTCGAGTTCTCGTTATATTTCCAACATCAACTACCCTTCCATAGCAATCTCCAACTTCACTGGGAAAGGTGTCGTGAACGTGAGTAGAACTGTAACAAACGTTGCTAAAGAGGAAGAAACAGTGTATTCCCCGGTTGTCGATGCTCCCAGTGAGGTAAATGTCAAGTTGATTCCAAATAAACTCCAATTTACGAAAAGTAGCAAAAAACTAAGCTACCAAATTATTTTTTCCTTGACTTCGACCACGCTGAAGAATGATCTATTTGGATCCATTACTTGGAGTAATGGTAAATACACTGTTCGAAGTCCTTTTGTATTAGCTAAGTAG 2295 0.461 MKDNSVFLLLFCIILLFLGEGNGSNDDTKRGVYIVYMGAAASTNVSLRSDHAYVLNSVLRRNEKALVRTYRHGFSGFAARLSEDEANSIAQKPGVVSVFPDPILKLHTTHSWDFLKNQFPVKIDDPNTVSNSSSSSDIVIGVLDTGIWPEAASFADEGMGPVPSRWKGTCMKSHDFNSSNCNRKLIGARYYPDPDKDEEYDTPRDIEGHGTHVASTAAGVAVSGASYYGVAAGTAKGGLPESRLAIYKVCFKYDCPGSAVLAAFDDAIADGVDVLSVSLGPIYVFRSELKSDPIAIGAFHAVERGIVVVCSAGNDGPSSNTVVNDAPWILTVGATTIDRDFQSNVVLGGNKVIKGEGINLSPLSNSPKYPLIYSESAKASGATLDEARQCFPDSLDEHKVKGKIVICDGRDHSYDTGLKVKAVKQAGGFGLAHSTDPKGAEASIYGGYPATEISYKDAATMLQYVNSTSNPVATILPTVTVIDYKPAPMVASFSSRGPSTFSPNIIKPDIAAPGVNILAAWIGGNGTQDVPKGRKPSHFNILSGTSMSCPHVAGIAGSIKSQNPTWSASAIRSAIMTSATQSNSLNAPITTDSGSVVTPYDYGSGQVTIYRPLQPGLVYETSTMDYLNYLCYVGLNTTMVKIISRTVPKSFNCPKDSSSRYISNINYPSIAISNFTGKGVVNVSRTVTNVAKEEETVYSPVVDAPSEVNVKLIPNKLQFTKSSKKLSYQIIFSLTSTTLKNDLFGSITWSNGKYTVRSPFVLAK* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1674 764 CDD Peptidases_S8_3 104 580 IPR034197 -
Apr5g1674 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 762 IPR045051 -
Apr5g1674 764 ProSitePatterns Serine proteases, subtilase family, histidine active site. 209 219 IPR022398 -
Apr5g1674 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Apr5g1674 764 Gene3D Peptidase S8/S53 domain 137 626 IPR036852 GO:0004252|GO:0006508
Apr5g1674 764 Gene3D - 338 482 - -
Apr5g1674 764 Gene3D - 630 764 - -
Apr5g1674 764 SUPERFAMILY Subtilisin-like 106 617 IPR036852 GO:0004252|GO:0006508
Apr5g1674 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 107 IPR037045 -
Apr5g1674 764 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 23 762 - -
Apr5g1674 764 Pfam Subtilase family 135 583 IPR000209 GO:0006508|GO:0008236
Apr5g1674 764 Pfam Peptidase inhibitor I9 32 107 IPR010259 -
Apr5g1674 764 ProSiteProfiles Serine proteases, subtilase domain profile. 111 613 - -
Apr5g1674 764 CDD PA_subtilisin_like 344 475 - -
Apr5g1674 764 Pfam Fibronectin type-III domain 664 761 IPR041469 -
Apr5g1674 764 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Apr5g1674 764 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Apr5g1674 764 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1674 Apr-Chr5 20316862 20321925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1674 25 762 Subtilisin-like Serine Gene Family AT1G20150 53.175 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1674 K25898 - gmx:100820194 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1674 5 20316862 20321925 Apr5g1674 5 20316862 20321925 ECH