Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1671 ATGGAGCTATGGAGTGTGGTGTTTGTGTGTTGTGTGTTGTGTCTGAGTCCCTCTTACACTGCAGAGGCTATCGTTAAGTTGGGAGGGAATGAAACAATTCCAGCATTGATTATTTTTGGAGATTCGATAGTTGACACAGGCAGTAACAATGAGTTAATTACAGTGCTTAAGAGCAATTTCCTTCCTTATGGGAGGGATTTCCAGCACGGGAAACCAACGGGAAGATTCTGCAATGGCAAGGTCCCTTCCGACTTCCTAGCGGAAGAATTGGGAATAAAACGATACATACCATCATATATGAGTCACAGTTTAGTGCCTGGGGATCTCCTTACGGGTGTCAACTTCGCTTCGGGTGGCTCCGGTTATGATCCAGTCACACCAACATTGGTGTCAGTCATACCGATGTCTGAGCAACTGGAGCAATTCAAAGGATACATAGAAAAACTGAAAGAAAATTTTGGAGAAGGAAGAACTAACTTCATCTTGTCCAAAAGTTTGGTACTTGTGGTAGCTAGCAGCAATGACATTGCCAATACTTATTATGCTGCTGGAATTAGGAGACTGCATTATGATATTCCCTCTTACACTGATATGTTGGTACAATTCGCCTCTTCTTTTGTTAAGGATATATATGCACTAGGGGCAAGGAGAATAGGAGTGTTTGGTGCTCCTCCACTGGGATGCTTGCCATTGGCGCGAACAATGTTTGGAGGTGAACAGAGAAAGTGCTCCCAAGAAATAAACTTGGCATCAAAATTGTTTAATTCGAAACTATCTGCAGAGCTGCACAACCTAAAACAAAGTTTGCCACAAGCCAGGGTGGTGTATATACATATTTACGACTCTTTGCTCGATATCATTCAAAATCCAACTAAACATGGATTTGACGTAGCTGATAGGGGATGCTGCGGCACAGGGACTTTAGAGGTGTCTTATATGTGTAATGAGTTAGATCCACAAACCTGCACAAACGATTCTGCATATGTTTTCTGGGACAGCTACCATCCCACAGAGAGGACGTATCAGATTCTTGTTAGTGAAATCATCAACAGATATATAAACAGCTTCTCCTGA 1074 0.4246 MELWSVVFVCCVLCLSPSYTAEAIVKLGGNETIPALIIFGDSIVDTGSNNELITVLKSNFLPYGRDFQHGKPTGRFCNGKVPSDFLAEELGIKRYIPSYMSHSLVPGDLLTGVNFASGGSGYDPVTPTLVSVIPMSEQLEQFKGYIEKLKENFGEGRTNFILSKSLVLVVASSNDIANTYYAAGIRRLHYDIPSYTDMLVQFASSFVKDIYALGARRIGVFGAPPLGCLPLARTMFGGEQRKCSQEINLASKLFNSKLSAELHNLKQSLPQARVVYIHIYDSLLDIIQNPTKHGFDVADRGCCGTGTLEVSYMCNELDPQTCTNDSAYVFWDSYHPTERTYQILVSEIINRYINSFS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1671 357 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Apr5g1671 357 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 353 - -
Apr5g1671 357 Pfam GDSL-like Lipase/Acylhydrolase 37 347 IPR001087 GO:0016788
Apr5g1671 357 SUPERFAMILY SGNH hydrolase 36 352 - -
Apr5g1671 357 Gene3D SGNH hydrolase 25 354 IPR036514 -
Apr5g1671 357 PANTHER GDSL ESTERASE/LIPASE EXL3 1 353 - -
Apr5g1671 357 CDD SGNH_plant_lipase_like 34 352 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1671 Apr-Chr5 20301702 20304367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1671 9 357 Pollen Coat Proteome AT1G75910 38.136 4.82e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1671 - - gmx:112997680 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1671 5 20301702 20304367 Apr5g1671 5 20301702 20304367 ECH
Apr9g0655 9 10672525 10674906 Apr5g1671 5 20301702 20304367 PCT
Apr5g1671 5 20301702 20304367 Apr9g0653 9 10601829 10605256 PCT