Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1670 ATGGCTCTGTTTATGAGGCTCTCTAGTTCTTCTTCAACTAGCTTAATGCTCAGCTTCATGTTATTGTTCATTTTATCTTTCAGAATAACAAAAGCTGCGGTGAGATTACCACCGAATATTTCAATTCCTGCAGTGATAGCTTTCGGAGATTCGATCGTGGACCCAGGAAACAACAACAAGATTAAAACACTGGTGAAGTGCAATTTCCCTCCTTACGGAAGAGATTTTGAGGGAGGGAACCCCACCGGTCGGTTTTGCAATGGCAAAATTCCAACGGACATGATAGTTGAAGAATTGGGCATTAAGGAGCTTTTACCAGCTTATTTGGATCCAAATCTCAAACCAAGTGACCTTGTTACGGGAGTCTGTTTTGCTTCCGGTGCCACTGGATTTGATCCTTTAACGCCAAAAATAGCGTCAGTGATATCATTGTCGGATCAACTAGAAATGTTCAAAGAATACATAGGGAAGCTTAAAGGCATTGTTGGAGAGGACAGAACAAACTTCATCCTAGCCAACAGTTTTTACCTTGTGGTAGCAGGAAGTGACGACATTGCCAACACCTATTTTATTGCTCGCGTTAGACAGTTACATTATGATATTCCAGCTTACACTGACCTTATGGTCAACTCAGCTTCCGCTTTCGTAAAGGAATTATATCAACTCGGAGCACGCAGAATCGGAGTACTGAGTGCACCACCGATTGGGTGCGTTCCATCACAGAGAACTCTGGCTGGAGGTTTACAAAGAGAGTGCGCTGAAAATTACAATTACGCGGCCAAGTTATATAATTCCAAACTGTCAAGGGAGCTGGGTTCTCTTGACCATAATTTGCCTAATAGTAGGATCATTTACATTGACATTTACAATCCCTTATTAGACATCATTGTGAACTACAGAAAATATGGCTACAAAGTTGCGGATAGAGGTTGCTGTGGCACAGGCAAACTAGAAGTTTCAGTGTTATGCAACCCTTTGGTTCCCACTTGTGCCGATGTTTCGGAATTCGTTTTTTGGGATAGTTATCATCCTACCGAAGGAGTATACAGAGTGATCGTGCATCAAATCCTTCAAAAATATTTGAATCGGTTCTTCTGA 1098 0.418 MALFMRLSSSSSTSLMLSFMLLFILSFRITKAAVRLPPNISIPAVIAFGDSIVDPGNNNKIKTLVKCNFPPYGRDFEGGNPTGRFCNGKIPTDMIVEELGIKELLPAYLDPNLKPSDLVTGVCFASGATGFDPLTPKIASVISLSDQLEMFKEYIGKLKGIVGEDRTNFILANSFYLVVAGSDDIANTYFIARVRQLHYDIPAYTDLMVNSASAFVKELYQLGARRIGVLSAPPIGCVPSQRTLAGGLQRECAENYNYAAKLYNSKLSRELGSLDHNLPNSRIIYIDIYNPLLDIIVNYRKYGYKVADRGCCGTGKLEVSVLCNPLVPTCADVSEFVFWDSYHPTEGVYRVIVHQILQKYLNRFF* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1670 365 CDD SGNH_plant_lipase_like 43 360 IPR035669 -
Apr5g1670 365 Pfam GDSL-like Lipase/Acylhydrolase 45 355 IPR001087 GO:0016788
Apr5g1670 365 PANTHER GDSL ESTERASE/LIPASE EXL3 11 364 - -
Apr5g1670 365 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 364 - -
Apr5g1670 365 Gene3D SGNH hydrolase 37 361 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1670 Apr-Chr5 20291835 20295071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1670 17 362 Pollen Coat Proteome AT1G75910 39.255 9.46e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1670 - - gmx:100793078 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1670 5 20291835 20295071 Apr5g1670 5 20291835 20295071 ECH
Apr9g0654 9 10661570 10666970 Apr5g1670 5 20291835 20295071 PCT
Apr5g1670 5 20291835 20295071 Apr9g0652 9 10597023 10600876 PCT